RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ARHGEF26Q96DR7 871 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 PCED1BQ96HM7 432 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 PPP1R13BQ96KQ4 1090 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 KCNK16Q96T55 309 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 SEPT5Q99719 369 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 HNRNPABQ99729 332 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 SMOQ99835 787 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 GDF15Q99988 308 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 TCF25Q9BQ70 676 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 CLSTN3Q9BQT9 956 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 DUSP16Q9BY84 665 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF518BQ9C0D4 1074 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 ZCWPW1Q9H0M4 648 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 THAP2Q9H0W7 228 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 CYP4F11Q9HBI6 524 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 LRRC4Q9HBW1 653 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 MRPL17Q9NRX2 175 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 KCND1Q9NSA2 647 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 UCKL1Q9NWZ5 548 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 GALNT8Q9NY28 637 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 NTMQ9P121 344 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 CTTNBP2NLQ9P2B4 639 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 CYTH4Q9UIA0 394 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 DUSP10Q9Y6W6 482 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 MICAL3Q7RTP6 2002 aa4.27□□□□□ -1.73
TMEM39A-204ENST00000468545 PDCD11Q14690 1871 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 OR6C75A6NL08 312 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 HIDE1A8MVS5 230 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 E5RJQ4 531 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 F8VP50 259 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 FFAR3O14843 346 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PER2O15055 1255 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GRM6O15303 877 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GPR39O43194 453 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 KRT86O43790 486 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 KIF5CO60282 957 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GRAP2O75791 330 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 LCA5LO95447 670 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PRLP01236 227 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ERBB2P04626 1255 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 CALB1P05937 261 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GZMAP12544 262 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 RRM1P23921 792 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 DNAJB1P25685 340 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ANXA13P27216 316 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 LSP1P33241 339 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ARHGAP25P42331 645 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GPD2P43304 727 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ID4P47928 161 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GLRBP48167 497 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 NDUFV1P49821 464 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 DNA2P51530 1060 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TKTL1P51854 596 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SNX16P57768 344 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SESN3P58005 492 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GNG11P61952 73 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 NOMO3P69849 1222 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ROR1Q01973 937 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ALDH6A1Q02252 535 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TAP1Q03518 808 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 BST2Q10589 180 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 GPR17Q13304 367 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SMC1AQ14683 1233 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 MESDQ14696 234 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TERF2Q15554 542 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 MAPRE1Q15691 268 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TAF12Q16514 161 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 NFE2Q16621 373 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PTPN20Q4JDL3 420 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF569Q5MCW4 686 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PRR31Q5SQ13 230 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 RNF219Q5W0B1 726 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 DNAJC24Q6P3W2 148 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM171BQ6P995 826 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 DCUN1D2Q6PH85 259 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM183BPQ6ZVS7 135 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PIGZQ86VD9 579 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 DDX42Q86XP3 938 aaKnown RBP eCLIP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SPATS2Q86XZ4 545 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 PHYKPLQ8IUZ5 450 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TDHQ8IZJ6 230 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SIX6OS1Q8N1H7 587 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TXLNBQ8N3L3 684 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF610Q8N9Z0 462 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 MSANTD4Q8NCY6 345 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 OLIG1Q8TAK6 271 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC35G2Q8TBE7 412 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SPATA18Q8TC71 538 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 CALML6Q8TD86 181 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 IPO4Q8TEX9 1081 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 C16orf45Q96MC5 204 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 KLHL5Q96PQ7 755 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TGS1Q96RS0 853 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 CPXM1Q96SM3 734 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 TACO1Q9BSH4 297 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms