RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 HNRNPDQ14103 355 aaKnown RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 KCNT1Q5JUK3 1230 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 PRPF39Q86UA1 669 aaKnown RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 TRIM69Q86WT6 500 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 KDF1Q8NAX2 398 aaPredicted RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 GRIN3AQ8TCU5 1115 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 PEBP4Q96S96 227 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 EIF3CQ99613 913 aaKnown RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 HEPHQ9BQS7 1158 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 XPO4Q9C0E2 1151 aaKnown RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 PREBQ9HCU5 417 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 MRPL47Q9HD33 250 aaKnown RBP19.8■□□□□ 0.76
GMDS-203ENST00000467288 TM7SF3Q9NS93 570 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 GPATCH2LQ9NWQ4 482 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 MYO1AQ9UBC5 1043 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 ZMIZ1Q9ULJ6 1067 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 HPCAL4Q9UM19 191 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 AP4E1Q9UPM8 1137 aa19.8■□□□□ 0.76
GMDS-203ENST00000467288 A0A1W2PR77 199 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 ZSCAN5CA6NGD5 496 aaPredicted RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 WNT9AO14904 365 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 FGF10O15520 208 aaPredicted RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 SH3BP5O60239 455 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 LEFTY1O75610 366 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 WNT1P04628 370 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 CD38P28907 300 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 NUDT1P36639 197 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 CCNHP51946 323 aaPredicted RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 CA9Q16790 459 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 ZNF423Q2M1K9 1284 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 ERMARDQ5T6L9 678 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 NEK5Q6P3R8 708 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 DBX2Q6ZNG2 339 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 CYP4V2Q6ZWL3 525 aaPredicted RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 ERN2Q76MJ5 926 aaKnown RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 ADAT2Q7Z6V5 191 aaKnown RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 VPS36Q86VN1 386 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 NAXDQ8IW45 347 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 UMODL1-AS1Q8N2C9 162 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 NCAPGQ9BPX3 1015 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.79■□□□□ 0.76
GMDS-203ENST00000467288 SNRNP25Q9BV90 132 aaKnown RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 TMEM121BQ9BXQ6 578 aaPredicted RBP19.79■□□□□ 0.76
GMDS-203ENST00000467288 HDAC8Q9BY41 377 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 DYRK4Q9NR20 520 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 PCSK1NQ9UHG2 260 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 DMTF1Q9Y222 760 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 PCDHGB2Q9Y5G2 931 aa19.79■□□□□ 0.76
GMDS-203ENST00000467288 PCNX2A6NKB5 2137 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 A0A087X0T9 212 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 RASA4BC9J798 803 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 RASA4O43374 803 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 LRCH4O75427 683 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 GSRP00390 522 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 FAM228BP0C875 321 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 MIPP30301 263 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 DNA2P51530 1060 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 TPI1P60174 286 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 PARP15Q460N3 678 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 NAPEPLDQ6IQ20 393 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 PSTKQ8IV42 348 aaKnown RBP19.78■□□□□ 0.76
GMDS-203ENST00000467288 SKA1Q96BD8 255 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 PPP1R16AQ96I34 528 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 SERAC1Q96JX3 654 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 CAMK1GQ96NX5 476 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 TM6SF2Q9BZW4 377 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 KLC2Q9H0B6 622 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 DHX35Q9H5Z1 703 aaKnown RBP19.78■□□□□ 0.76
GMDS-203ENST00000467288 AASDHPPTQ9NRN7 309 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 DONSONQ9NYP3 566 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 HECAQ9UBI9 543 aaPredicted RBP19.78■□□□□ 0.76
GMDS-203ENST00000467288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.78■□□□□ 0.76
GMDS-203ENST00000467288 CACNA1GO43497 2377 aa19.78■□□□□ 0.76
GMDS-203ENST00000467288 SPAARA0A1B0GVQ0 90 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 H0Y8X5 98 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 BUB1O43683 1085 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 CBFA2T3O75081 653 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 TPM3P06753 285 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 ITGB7P26010 798 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 HNRNPH3P31942 346 aaKnown RBP19.77■□□□□ 0.76
GMDS-203ENST00000467288 CASP14P31944 242 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 C21orf59P57076 290 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 FAM193AP78312 1265 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 SERINC3Q13530 473 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 ACAP1Q15027 740 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 INO80DQ53TQ3 878 aaPredicted RBP19.77■□□□□ 0.76
GMDS-203ENST00000467288 LEKR1Q6ZMV7 388 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 OR2AP1Q8NGE2 309 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 CASKIN2Q8WXE0 1202 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 VOPP1Q96AW1 172 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 HMCESQ96FZ2 354 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 LRIG1Q96JA1 1093 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 TSPY26PQ9H489 355 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 LRRC19Q9H756 370 aa19.77■□□□□ 0.76
GMDS-203ENST00000467288 AKAP13Q12802 2813 aa19.76■□□□□ 0.75
GMDS-203ENST00000467288 EEF2KO00418 725 aaKnown RBP19.76■□□□□ 0.75
GMDS-203ENST00000467288 KCNK3O14649 394 aa19.76■□□□□ 0.75
GMDS-203ENST00000467288 PRPSAP2O60256 369 aa19.76■□□□□ 0.75
GMDS-203ENST00000467288 DFNA5O60443 496 aa19.76■□□□□ 0.75
GMDS-203ENST00000467288 RNGTTO60942 597 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms