RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 KPNA3O00505 521 aaPredicted RBP12.91□□□□□ -0.34
UBR4-210ENST00000466969 MCF2LO15068 1137 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 RAD51BO15315 384 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 DPM1O60762 260 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 STAU1O95793 577 aaKnown RBP12.91□□□□□ -0.34
UBR4-210ENST00000466969 TNNI1P19237 187 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 MAN1A1P33908 653 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBR4-210ENST00000466969 SGCGQ13326 291 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 AMZ1Q400G9 498 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 FSCBQ5H9T9 825 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 ANKS6Q68DC2 871 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 ZNF438Q7Z4V0 828 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 FAM129CQ86XR2 697 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 C12orf29Q8N999 325 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 FRS2Q8WU20 508 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 RNF34Q969K3 372 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
UBR4-210ENST00000466969 FEM1CQ96JP0 617 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 CCDC74BQ96LY2 380 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 CBWD1Q9BRT8 395 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 LRIT1Q9P2V4 623 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 POLEQ07864 2286 aa12.91□□□□□ -0.34
UBR4-210ENST00000466969 ZNF469Q96JG9 3925 aaPredicted RBP12.91□□□□□ -0.34
UBR4-210ENST00000466969 FN1P02751 2386 aaKnown RBP12.91□□□□□ -0.34
UBR4-210ENST00000466969 GOLGA6L7A0A1B0GV03 622 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 CDC14CA4D256 554 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 STX6O43752 255 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 BNIP3LO60238 219 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 PFKFB2O60825 505 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 SSTR2P30874 369 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 ATICP31939 592 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 SLC11A2P49281 568 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 MYL6P60660 151 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 PFN3P60673 137 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 CDK18Q07002 472 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 KCNA1Q09470 495 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBR4-210ENST00000466969 TCEA2Q15560 299 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 APCDD1Q8J025 514 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 RNF139Q8WU17 664 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 SNRNP40Q96DI7 357 aaKnown RBP12.9□□□□□ -0.34
UBR4-210ENST00000466969 TRIM8Q9BZR9 551 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 CHST11Q9NPF2 352 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 ASF1BQ9NVP2 202 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
UBR4-210ENST00000466969 ZNF451Q9Y4E5 1061 aa12.9□□□□□ -0.34
UBR4-210ENST00000466969 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
UBR4-210ENST00000466969 PCDHGA9Q9Y5G4 932 aaKnown RBP12.9□□□□□ -0.34
UBR4-210ENST00000466969 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
UBR4-210ENST00000466969 IGHV5-10-1A0A0J9YXX1 117 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 B4E171 279 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 FURINP09958 794 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
UBR4-210ENST00000466969 IDEP14735 1019 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 TSPAN7P41732 249 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 CENPCQ03188 943 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 ART3Q13508 389 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 SEMA5AQ13591 1074 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 IL17AQ16552 155 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 EDRF1Q3B7T1 1238 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 TMEM119Q4V9L6 283 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 L1TD1Q5T7N2 865 aaKnown RBP12.89□□□□□ -0.35
UBR4-210ENST00000466969 CRYBG2Q8N1P7 616 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 LENG8Q96PV6 779 aaPredicted RBP12.89□□□□□ -0.35
UBR4-210ENST00000466969 RANBP9Q96S59 729 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
UBR4-210ENST00000466969 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
UBR4-210ENST00000466969 PNMA8BQ9ULN7 279 aaPredicted RBP12.89□□□□□ -0.35
UBR4-210ENST00000466969 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 ZW10O43264 779 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 GRID2O43424 1007 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 PRPHP41219 470 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 STAT5AP42229 794 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 NUMBP49757 651 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 ITGA1P56199 1179 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 RPS24P62847 133 aaKnown RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 CLPPQ16740 277 aaPredicted RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 VWA2Q5GFL6 755 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 Q6ZVU0 165 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 IQCKQ8N0W5 287 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 ESX1Q8N693 406 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 KCTD13Q8WZ19 329 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms