RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PTPRN2Q92932 1015 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 CINPQ9BW66 212 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 USP29Q9HBJ7 922 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 CD248Q9HCU0 757 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 LHX3Q9UBR4 397 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 FCF1Q9Y324 198 aaKnown RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 ACTL7AQ9Y615 435 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 PLXND1Q9Y4D7 1925 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 A0A1W2PQF6 199 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 WASH3PC4AMC7 463 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CCDC188H7C350 402 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 SGK1O00141 431 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 KCNK1O00180 336 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 PHF2O75151 1096 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 IGSF6O95976 241 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 HOXB2P14652 356 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CR2P20023 1033 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CES1P23141 567 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 PTPN3P26045 913 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 RBL1P28749 1068 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 MAPK8P45983 427 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 FNTAP49354 379 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 RHOAP61586 193 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 SNRPD1P62314 119 aaKnown RBP15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CKAP4Q07065 602 aaKnown RBP15.43■□□□□ 0.06
NPHP4-205ENST00000466897 WASHC5Q12768 1159 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 ELAVL3Q14576 367 aaKnown RBP15.43■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF235Q14590 738 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 STARD3Q14849 445 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CRY1Q16526 586 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 WHAMMP3Q1A5X7 153 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 TEX44Q53QW1 395 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 C9orf64Q5T6V5 341 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 FBXL6Q8N531 539 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 OR2A12Q8NGT7 310 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 C1orf54Q8WWF1 131 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 PBXIP1Q96AQ6 731 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF419Q96HQ0 510 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-205ENST00000466897 CAPZA3Q96KX2 299 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 GDAP1L1Q96MZ0 367 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 FAM118BQ9BPY3 351 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 EPHX3Q9H6B9 360 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 TRHDEQ9UKU6 1024 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
NPHP4-205ENST00000466897 C5orf60A6NFR6 353 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 RNF103O00237 685 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 PDE2AO00408 941 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 SYNCRIPO60506 623 aaKnown RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 URI1O94763 535 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 STK10O94804 968 aaKnown RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 EPHX1P07099 455 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 DCNP07585 359 aaKnown RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 CHRNA3P32297 505 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 RECQLP46063 649 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 DGKEP52429 567 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 LMNB2Q03252 620 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 ZBTB17Q13105 803 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 GRM3Q14832 879 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 SLC14A2Q15849 920 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 CARD16Q5EG05 197 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 PKN3Q6P5Z2 889 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 LEKR1Q6ZMV7 388 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 Q6ZVU0 165 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 PGBD5Q8N414 524 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 LRIG1Q96JA1 1093 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 RUNDC3BQ96NL0 473 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 TMEM121Q9BTD3 319 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 AP1M1Q9BXS5 423 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 POLR1EQ9GZS1 481 aaKnown RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 ZDHHC4Q9NPG8 344 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 PRSS16Q9NQE7 514 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 RBM22Q9NW64 420 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 SMARCAL1Q9NZC9 954 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-205ENST00000466897 MRFAP1Q9Y605 127 aa15.42■□□□□ 0.06
NPHP4-205ENST00000466897 KCNN4O15554 427 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 PI15O43692 258 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 OPHN1O60890 802 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 SIN3BO75182 1162 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 JCHAINP01591 159 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 HLA-DQB2P05538 268 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 HLA-EP13747 358 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 CCR3P51677 355 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 CCNHP51946 323 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-205ENST00000466897 AP1S1P61966 158 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 P3H1Q32P28 736 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 DSG4Q86SJ6 1040 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 CNTD1Q8N815 330 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 OR2T3Q8NH03 318 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 ATL2Q8NHH9 583 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 LRRN4Q8WUT4 740 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 OR8D1Q8WZ84 308 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 SLCO2A1Q92959 643 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 MAGOHBQ96A72 148 aaKnown RBP15.41■□□□□ 0.06
NPHP4-205ENST00000466897 SPATA13Q96N96 652 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms