RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SPC24Q8NBT2 197 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 CHST14Q8NCH0 376 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 TPCN2Q8NHX9 752 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 PCDH19Q8TAB3 1148 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 RAPGEF5Q92565 580 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 FATE1Q969F0 183 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 CELF6Q96J87 481 aaKnown RBP9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZNF599Q96NL3 588 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 HEPHQ9BQS7 1158 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 ORAI3Q9BRQ5 295 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 HDAC8Q9BY41 377 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 BTBD1Q9H0C5 482 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 TNKS2Q9H2K2 1166 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 SEMA4GQ9NTN9 838 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 LHX3Q9UBR4 397 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 IL36AQ9UHA7 158 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 TPX2Q9ULW0 747 aaKnown RBP9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 NCKAP1Q9Y2A7 1128 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 ALG6Q9Y672 507 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 PCDH15Q96QU1 1955 aa9.64□□□□□ -0.87
SDCCAG3-208ENST00000466579 TMEM110-MUSTN1A8MSY1 372 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 GOLGA6L6A8MZA4 724 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 RNF103O00237 685 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 PSTPIP1O43586 416 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 PLRG1O43660 514 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 IPO7O95373 1038 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 POP4O95707 220 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ITPKAP23677 461 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ITGB7P26010 798 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 SSR1P43307 286 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 RECQLP46063 649 aaPredicted RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CSNK1DP48730 415 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCR5P51681 352 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 METAP1P53582 386 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ADPRHP54922 357 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 SNRPD1P62314 119 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CREB5Q02930 508 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 GALNT2Q10471 571 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 MYLK3Q32MK0 819 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 PIP5KL1Q5T9C9 394 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 TMCO4Q5TGY1 634 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLC23A3Q6PIS1 610 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 PRR23CQ6ZRP0 262 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 RABEPKQ7Z6M1 372 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CACUL1Q86Y37 369 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 TP53INP2Q8IXH6 220 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 RHOT1Q8IXI2 618 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 HDDC3Q8N4P3 179 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 PQLC3Q8N755 202 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 KCTD6Q8NC69 237 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ACRBPQ8NEB7 543 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 OR2T34Q8NGX1 318 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CEP76Q8TAP6 659 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARRDC3Q96B67 414 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 HSPA12BQ96MM6 686 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 RNF157Q96PX1 679 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 GPR174Q9BXC1 333 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 OSBPL1AQ9BXW6 950 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 CPEB1Q9BZB8 566 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 C6orf106Q9H6K1 298 aaPredicted RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 TMEM74BQ9NUR3 256 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 DDX56Q9NY93 547 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 HECAQ9UBI9 543 aaPredicted RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 UBA2Q9UBT2 640 aaPredicted RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 IPO11Q9UI26 975 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 TFR2Q9UP52 801 aa9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.63□□□□□ -0.87
SDCCAG3-208ENST00000466579 LATO43561 262 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 MAFKO60675 156 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 LEFTY1O75610 366 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 RNASEH2AO75792 299 aaKnown RBP9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 IGHV4-34P06331 123 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 NOP2P46087 812 aaKnown RBP9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 LIMK1P53667 647 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 TAS2R38P59533 333 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 NSUN2Q08J23 767 aaKnown RBP eCLIP9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCDC15Q0P6D6 951 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 CNTN1Q12860 1018 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 WDR45BQ5MNZ6 344 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 SYCP2LQ5T4T6 812 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 DCAF12L1Q5VU92 463 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 KIAA0895LQ68EN5 471 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLC9A4Q6AI14 798 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 LEKR1Q6ZMV7 388 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARHGAP36Q6ZRI8 547 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 FAM124AQ86V42 546 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 TXLNBQ8N3L3 684 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 TEX26Q8N6G2 289 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 LRRC57Q8N9N7 239 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCDC112Q8NEF3 446 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 HCAR2Q8TDS4 363 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 MAML1Q92585 1016 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 PIGKQ92643 395 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms