RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 GLOD4Q9HC38 313 aa18.58■□□□□ 0.56
SYNE4-204ENST00000465425 PDP2Q9P2J9 529 aa18.58■□□□□ 0.56
SYNE4-204ENST00000465425 VTI1BQ9UEU0 232 aa18.58■□□□□ 0.56
SYNE4-204ENST00000465425 RGSL1A5PLK6 1076 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 PAMP19021 973 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 PIK3R1P27986 724 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 GEMP55040 296 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 MPP1Q00013 466 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 RNF220Q5VTB9 566 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 NXNQ6DKJ4 435 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 LRRC8EQ6NSJ5 796 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 AGMOQ6ZNB7 445 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 TMEM151AQ8N4L1 468 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 LZTR1Q8N653 840 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 CNDP1Q96KN2 507 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 SERPINI1Q99574 410 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 TSC22D3Q99576 134 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 RTP3Q9BQQ7 232 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 UBE2OQ9C0C9 1292 aaKnown RBP18.57■□□□□ 0.56
SYNE4-204ENST00000465425 KLHL4Q9C0H6 718 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 XPR1Q9UBH6 696 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 G3BP2Q9UN86 482 aaKnown RBP18.57■□□□□ 0.56
SYNE4-204ENST00000465425 CDYLQ9Y232 598 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 FAM95CA0A1B0GW59 222 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 FGF10O15520 208 aaPredicted RBP18.57■□□□□ 0.56
SYNE4-204ENST00000465425 IRAK2O43187 625 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 LYNP07948 512 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 SBK3P0C264 359 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 DNAJB1P25685 340 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 GABRB3P28472 473 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 CCR10P46092 362 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 ZNF460Q14592 562 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 BRMS1LQ5PSV4 323 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 ESRP1Q6NXG1 681 aaKnown RBP18.57■□□□□ 0.56
SYNE4-204ENST00000465425 FAM171BQ6P995 826 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 POTEHQ6S545 545 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 C16orf89Q6UX73 402 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 SNX32Q86XE0 403 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 CNTN4Q8IWV2 1026 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 KLHDC8BQ8IXV7 354 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 CENPLQ8N0S6 344 aaPredicted RBP18.57■□□□□ 0.56
SYNE4-204ENST00000465425 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 SCAMP5Q8TAC9 235 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 PPP1R2P1Q96PQ5 205 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 HAPLN3Q96S86 360 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 FTHL17Q9BXU8 183 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 ARHGEF38Q9NXL2 777 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 ZDHHC2Q9UIJ5 367 aa18.57■□□□□ 0.56
SYNE4-204ENST00000465425 MATN3O15232 486 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 MAFKO60675 156 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 RAG1P15918 1043 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 YY1P25490 414 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 CCR1P32246 355 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PPARGP37231 505 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 POLD2P49005 469 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 BTBD8Q5XKL5 378 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ARHGAP12Q8IWW6 846 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 SCML4Q8N228 414 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 KYQ8NBH2 561 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 RP9Q8TA86 221 aaKnown RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 HASPINQ8TF76 798 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 GDPD5Q8WTR4 605 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ENTPD7Q9NQZ7 604 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ADAMTS6Q9UKP5 1117 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ENO4A6NNW6 628 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PMPCBO75439 489 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PAGE1O75459 146 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 POMCP01189 267 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ZCCHC18P0CG32 403 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 BRCC3P46736 316 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 SLC12A2P55011 1212 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 GRIK3Q13003 919 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 CYLC2Q14093 348 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 MAP3K21Q5TCX8 1036 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 LPCAT4Q643R3 524 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 SDCCAG8Q86SQ7 713 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 SETD3Q86TU7 594 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PDSS2Q86YH6 399 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 CCNYL1Q8N7R7 359 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PTCD2Q8WV60 388 aaKnown RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ELMO2Q96JJ3 720 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 IL12RB2Q99665 862 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ABCC13Q9NSE7 274 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 PRPF19Q9UMS4 504 aaKnown RBP18.56■□□□□ 0.56
SYNE4-204ENST00000465425 NEU3Q9UQ49 428 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 TCAF1Q9Y4C2 921 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 ASB3Q9Y575 518 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 CENPFP49454 3210 aa18.56■□□□□ 0.56
SYNE4-204ENST00000465425 GPR182O15218 404 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 SLC22A2O15244 555 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 IGLV3-25P01717 112 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 TRIP10Q15642 601 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 PPM1LQ5SGD2 360 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 TIGD7Q6NT04 549 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 RNF111Q6ZNA4 994 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 KDELC2Q7Z4H8 507 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 DOCK3Q8IZD9 2030 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 NXNL1Q96CM4 212 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 FCRL2Q96LA5 508 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms