RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 TMCO5BA8MYB1 307 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 KRT37O76014 449 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 L1CAMP32004 1257 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 SHBQ15464 509 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 PPP1R2P3Q6NXS1 205 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 GATAD2AQ86YP4 633 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 HEPHQ9BQS7 1158 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 HDAC8Q9BY41 377 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 TOR4AQ9NXH8 423 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 HPCAL4Q9UM19 191 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 COL5A1P20908 1838 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-206ENST00000464750 TRPM6Q9BX84 2022 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 PRAMEF26H0Y7S4 382 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 YKT6O15498 198 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 ATXN1LP0C7T5 689 aaKnown RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 DESP17661 470 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 EPHB2P29323 1055 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 NEK3P51956 506 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 GEMIN4P57678 1058 aaKnown RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 OGDHQ02218 1023 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 IQCB1Q15051 598 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 POLD3Q15054 466 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 E4F1Q66K89 784 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 NEK5Q6P3R8 708 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 HORMAD1Q86X24 394 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 RTL3Q8N8U3 475 aaKnown RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 NAP1L5Q96NT1 182 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-206ENST00000464750 ZDHHC6Q9H6R6 413 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 FZD10Q9ULW2 581 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 CA5BQ9Y2D0 317 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 ASPMQ8IZT6 3477 aa26.35■■□□□ 1.81
U2AF1-206ENST00000464750 FAM221BA6H8Z2 402 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 GOLGA8CPA6NN73 597 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 ATMINO43313 823 aaPredicted RBP26.34■■□□□ 1.81
U2AF1-206ENST00000464750 CREB3O43889 395 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 PRLRP16471 622 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 ITGB7P26010 798 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 EPHA8P29322 1005 aaPredicted RBP26.34■■□□□ 1.81
U2AF1-206ENST00000464750 ARRB1P49407 418 aaPredicted RBP26.34■■□□□ 1.81
U2AF1-206ENST00000464750 STAT4Q14765 748 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 SFMBT2Q5VUG0 894 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 TMC6Q7Z403 805 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 IQCHQ86VS3 1027 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 SPATS2Q86XZ4 545 aaKnown RBP26.34■■□□□ 1.81
U2AF1-206ENST00000464750 OXR1Q8N573 874 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 KLK6Q92876 244 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 ISG20Q96AZ6 181 aaKnown RBP26.34■■□□□ 1.81
U2AF1-206ENST00000464750 VCPIP1Q96JH7 1222 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 EPAS1Q99814 870 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 MYOCQ99972 504 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 HAUS4Q9H6D7 363 aa26.34■■□□□ 1.81
U2AF1-206ENST00000464750 PLXNB3Q9ULL4 1909 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 TMEM8BA6NDV4 472 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 SLC31A1O15431 190 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 TNFSF14O43557 240 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 MAGEC1O60732 1142 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 PCDH8O95206 1070 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 SERPINC1P01008 464 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 ITGAVP06756 1048 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 AIF1P55008 147 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 OVGP1Q12889 678 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 LEKR1Q6ZMV7 388 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 ZNF354CQ86Y25 554 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 RYBPQ8N488 228 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-206ENST00000464750 KDF1Q8NAX2 398 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-206ENST00000464750 OR6K2Q8NGY2 324 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 SAP25Q8TEE9 199 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 ERVMER34-1Q9H9K5 563 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 PARVAQ9NVD7 372 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 HECAQ9UBI9 543 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-206ENST00000464750 FTSJ1Q9UET6 329 aa26.33■■□□□ 1.81
U2AF1-206ENST00000464750 SYCE3A1L190 88 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 KDELR3O43731 214 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 ADRB3P13945 408 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 MAMLD1Q13495 774 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 ZNF284Q2VY69 593 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 PLEKHA7Q6IQ23 1121 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 PARS2Q7L3T8 475 aaKnown RBP26.32■■□□□ 1.8
U2AF1-206ENST00000464750 ZNF571Q7Z3V5 609 aaPredicted RBP26.32■■□□□ 1.8
U2AF1-206ENST00000464750 DNAAF5Q86Y56 855 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 PLPP6Q8IY26 295 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 TMEM145Q8NBT3 493 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 TTYH3Q9C0H2 523 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 NOL6Q9H6R4 1146 aaKnown RBP26.32■■□□□ 1.8
U2AF1-206ENST00000464750 FZD3Q9NPG1 666 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 AIPL1Q9NZN9 384 aa26.32■■□□□ 1.8
U2AF1-206ENST00000464750 DKK1O94907 266 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 GSRP00390 522 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 PSMA2P25787 234 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 GKP32189 559 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 PRKCIP41743 596 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 KLHL40Q2TBA0 621 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 SEL1L3Q68CR1 1132 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 FBXL19Q6PCT2 694 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 OR2AP1Q8NGE2 309 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 CATSPERBQ9H7T0 1116 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 ZMIZ1Q9ULJ6 1067 aa26.31■■□□□ 1.8
U2AF1-206ENST00000464750 ZFR2Q9UPR6 939 aaKnown RBP26.31■■□□□ 1.8
U2AF1-206ENST00000464750 ZSCAN5CA6NGD5 496 aaPredicted RBP26.3■■□□□ 1.8
U2AF1-206ENST00000464750 BUB1O43683 1085 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms