RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 RYBPQ8N488 228 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 HDDC3Q8N4P3 179 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 RNF10Q8N5U6 811 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 LRRC57Q8N9N7 239 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 OR2AP1Q8NGE2 309 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 HEPHQ9BQS7 1158 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 BTBD1Q9H0C5 482 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 GMEB2Q9UKD1 530 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 GPR179Q6PRD1 2367 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 CEP192Q8TEP8 1941 aa14.76□□□□□ -0.05
SQSTM1-205ENST00000464493 MFSD11O43934 449 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 GFRA3O60609 400 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 MAFKO60675 156 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RNASEH2AO75792 299 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 POP4O95707 220 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RETP07949 1114 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 CCDC175P0C221 793 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 ACSL1P33121 698 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 CTNNA1P35221 906 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 CDKN2BP42772 138 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 MARCKSL1P49006 195 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 CCNHP51946 323 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RHOAP61586 193 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 MYLK3Q32MK0 819 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 SYCE1Q8N0S2 351 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 ATPAF2Q8N5M1 289 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 AADATQ8N5Z0 425 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 DEFB119Q8N690 84 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RUBCNQ92622 972 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 KRT35Q92764 455 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF599Q96NL3 588 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 GPR174Q9BXC1 333 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 NEUROG2Q9H2A3 272 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 SGK2Q9HBY8 427 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 NCDNQ9UBB6 729 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 SERGEFQ9UGK8 458 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 AMFRQ9UKV5 643 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 FZD4Q9ULV1 537 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 GUCA1BQ9UMX6 200 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 RIF1Q5UIP0 2472 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-205ENST00000464493 OTOGLQ3ZCN5 2332 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 CCDC66A2RUB6 948 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 KPNA3O00505 521 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 APOL1O14791 398 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 LEFTY1O75610 366 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 IGSF6O95976 241 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 PTMAP06454 111 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 ZFXP17010 805 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GARSP41250 739 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 DHPSP49366 369 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 METAP1P53582 386 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GBE1Q04446 702 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 RAD51Q06609 339 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GALNT2Q10471 571 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 TAZQ16635 292 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 POM121L1PQ3SYA9 428 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 ATXN7L2Q5T6C5 722 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 SLC9A4Q6AI14 798 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 SPOCD1Q6ZMY3 1216 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 PEX26Q7Z412 305 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 NT5DC3Q86UY8 548 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 RFX6Q8HWS3 928 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 PLD5Q8N7P1 536 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 CADM4Q8NFZ8 388 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 OR6K2Q8NGY2 324 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 EXD1Q8NHP7 514 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GRIN3AQ8TCU5 1115 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 NSMCE1Q8WV22 266 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF419Q96HQ0 510 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 LRIG1Q96JA1 1093 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 PDLIM2Q96JY6 352 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GDAP1L1Q96MZ0 367 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 HINFPQ9BQA5 517 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 ZDHHC6Q9H6R6 413 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 NUMA1Q14980 2115 aa14.74□□□□□ -0.05
SQSTM1-205ENST00000464493 GON4LQ3T8J9 2241 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 EP300Q09472 2414 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SHROOM3Q8TF72 1996 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 RNF103O00237 685 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 KRIT1O00522 736 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 EPN2O95208 641 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SEMA4FO95754 770 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PEX11BO96011 259 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 MX2P20592 715 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 CTNNA2P26232 953 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 GKP32189 559 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 DRD3P35462 400 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PTGER3P43115 390 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 PEX5P50542 639 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 CREB5Q02930 508 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 ZNF33AQ06730 810 aa14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
SQSTM1-205ENST00000464493 SLC10A7Q0GE19 358 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms