RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 C7orf26Q96N11 449 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 FRG2BQ96QU4 278 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 EYA3Q99504 573 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 CLSTN3Q9BQT9 956 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 IFT27Q9BW83 186 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 ACTR5Q9H9F9 607 aaPredicted RBP4.43□□□□□ -1.7
CLK1-208ENST00000464454 UPB1Q9UBR1 384 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SLC4A4Q9Y6R1 1079 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 A0A1W2PPH5 198 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 PER2O15055 1255 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 BAIAP3O94812 1187 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 TMEM63AO94886 807 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 NDUFB8O95169 186 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 EPN2O95208 641 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 PSG1P11464 419 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 MAN1A1P33908 653 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 SLC16A2P36021 539 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 PRICKLE4Q2TBC4 344 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 R3HCC1LQ7Z5L2 792 aaKnown RBP4.42□□□□□ -1.7
CLK1-208ENST00000464454 MON1AQ86VX9 555 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 CCDC25Q86WR0 208 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 SLC25A41Q8N5S1 370 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 TMEM217Q8N7C4 229 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 NFKBIDQ8NI38 313 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 UCMAQ8WVF2 138 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 RAB40AQ8WXH6 277 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 HSPH1Q92598 858 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 LPAR1Q92633 364 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 ZNF419Q96HQ0 510 aaPredicted RBP4.42□□□□□ -1.7
CLK1-208ENST00000464454 LMAN2LQ9H0V9 348 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 EPHX3Q9H6B9 360 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 ZBTB40Q9NUA8 1239 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 HDAC6Q9UBN7 1215 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 AASSQ9UDR5 926 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 CNPY2Q9Y2B0 182 aa4.42□□□□□ -1.7
CLK1-208ENST00000464454 A0A087X0M5 115 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 TMEM272A0A1B0GTI8 110 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 A0A1B0GX30 115 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 FAM90A10PA6NDY2 464 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 B4DGG1 531 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 F5H0A9 414 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 H3BNX3 289 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 MDM4O15151 490 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 KIF1CO43896 1103 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 ATG13O75143 517 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 OAZ2O95190 189 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 CBX6O95503 412 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 DDX58O95786 925 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 IFNA2P01563 188 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 KLKB1P03952 638 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 URODP06132 367 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 CHRNB1P11230 501 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 KCNJ4P48050 445 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 POLGP54098 1239 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 EIF5P55010 431 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 PTP4A2Q12974 167 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 PRTGQ2VWP7 1150 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 ENTPD8Q5MY95 495 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 UBAP2Q5T6F2 1119 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 TTLL5Q6EMB2 1281 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 HMBOX1Q6NT76 420 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 INO80CQ6PI98 192 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 C4orf50Q6ZRC1 276 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 H1FNTQ75WM6 255 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 IRF2BP2Q7Z5L9 587 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 TBC1D1Q86TI0 1168 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 CHD1LQ86WJ1 897 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 DNAAF1Q8NEP3 725 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 TDRD7Q8NHU6 1098 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 TMEM174Q8WUU8 243 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 MSI2Q96DH6 328 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 TEFMQ96QE5 360 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 FRMD8Q9BZ67 464 aaPredicted RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 FAM234AQ9H0X4 552 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 MAP3K20Q9NYL2 800 aaKnown RBP4.41□□□□□ -1.7
CLK1-208ENST00000464454 IL1RAPL1Q9NZN1 696 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 FBXO40Q9UH90 709 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 ICKQ9UPZ9 632 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 CAMK2AQ9UQM7 478 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 NAALADL1Q9UQQ1 740 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 SQORQ9Y6N5 450 aa4.41□□□□□ -1.7
CLK1-208ENST00000464454 A0A1W2PPC1 479 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 A6NNC1 897 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 CEP104O60308 925 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 SERPINC1P01008 464 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 IL1AP01583 271 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 COX7A2P14406 83 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 CAPN3P20807 821 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 KLRC2P26717 231 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 ARL1P40616 181 aaPredicted RBP4.4□□□□□ -1.71
CLK1-208ENST00000464454 CCR9P51686 369 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 UFM1P61960 85 aa4.4□□□□□ -1.71
CLK1-208ENST00000464454 PTGR1Q14914 329 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms