RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 POLG2Q9UHN1 485 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 CDH22Q9UJ99 828 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 SRPRBQ9Y5M8 271 aaKnown RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ABHD14A-ACY1A0A1B0GW23 586 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 GRM8O00222 908 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 NAGAP17050 411 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 CLCN5P51795 746 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 CDH12P55289 794 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 CDK18Q07002 472 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 BIRC3Q13489 604 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 PTK2BQ14289 1009 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 HNF4GQ14541 408 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 TUBB8Q3ZCM7 444 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 HYIQ5T013 277 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 KIAA1324Q6UXG2 1013 aaKnown RBP4.44□□□□□ -1.7
ITGB1-208ENST00000464001 CREBRFQ8IUR6 639 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 FAM186BQ8IYM0 893 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 ZDHHC23Q8IYP9 409 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 TMEM163Q8TC26 289 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 POF1BQ8WVV4 589 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 FRG2BQ96QU4 278 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 PIGSQ96S52 555 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 IFT27Q9BW83 186 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 ARFGAP3Q9NP61 516 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 RAI2Q9Y5P3 530 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 DGKBQ9Y6T7 804 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 RPGRIP1LQ68CZ1 1315 aa4.44□□□□□ -1.7
ITGB1-208ENST00000464001 PLSCR5A0PG75 271 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 HSPB6O14558 160 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 SLC16A5O15375 505 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 LINC01565O15544 149 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 FFAR2O15552 330 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 RNMTO43148 476 aaKnown RBP4.43□□□□□ -1.7
ITGB1-208ENST00000464001 LDB2O43679 373 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 KCNJ13O60928 360 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 HEXIM1O94992 359 aaKnown RBP4.43□□□□□ -1.7
ITGB1-208ENST00000464001 SETSIPP0DME0 302 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 TYK2P29597 1187 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 PKP1Q13835 747 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 RPS6KA2Q15349 733 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 KIF19Q2TAC6 998 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF284Q2VY69 593 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 C1QTNF12Q5T7M4 302 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 JAKMIP3Q5VZ66 844 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 TMEM268Q5VZI3 342 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 MON1BQ7L1V2 547 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 RAB11FIP2Q7L804 512 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF329Q86UD4 541 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 VPS52Q8N1B4 723 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 TTC30BQ8N4P2 665 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 TCP11L2Q8N4U5 519 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 NKAPQ8N5F7 415 aaKnown RBP4.43□□□□□ -1.7
ITGB1-208ENST00000464001 SLC2A12Q8TD20 617 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 FAR1Q8WVX9 515 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 KCNJ9Q92806 393 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 EID2BQ96D98 161 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 EIF2AK1Q9BQI3 630 aaKnown RBP4.43□□□□□ -1.7
ITGB1-208ENST00000464001 RSPH9Q9H1X1 276 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-208ENST00000464001 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 BAG5Q9UL15 447 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 MST1RQ04912 1400 aa4.43□□□□□ -1.7
ITGB1-208ENST00000464001 EYA2O00167 538 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 HNRNPRO43390 633 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 ANP32CO43423 234 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 KIF1CO43896 1103 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CCNT1O60563 726 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 SOX30O94993 753 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 TNFRSF6BO95407 300 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 MMP3P08254 477 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 ITGA2BP08514 1039 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 FCGR2AP12318 317 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF12P17014 697 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 RFC1P35251 1148 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 PPM1AP35813 382 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CLCNKBP51801 687 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 EEF1A2Q05639 463 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 TRIM14Q14142 442 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CFAP161Q6P656 301 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 C16orf54Q6UWD8 224 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 LDHAL6AQ6ZMR3 332 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 GET4Q7L5D6 327 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 MAATS1Q7Z4T9 603 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 TMED6Q8WW62 240 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CPT1BQ92523 772 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 CADM1Q9BY67 442 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 RETREG1Q9H6L5 497 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 OBP2BQ9NPH6 170 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 FBXO2Q9UK22 296 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-208ENST00000464001 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms