RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ZNF776Q68DI1 518 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 KIAA1324Q6UXG2 1013 aaKnown RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 BBS12Q6ZW61 710 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 ATPAF2Q8N5M1 289 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 FAM160A2Q8N612 972 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 TRIM58Q8NG06 486 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 ZNF599Q96NL3 588 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 OLFM3Q96PB7 478 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 LGMNQ99538 433 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 TLR10Q9BXR5 811 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 USP36Q9P275 1121 aaKnown RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 HECAQ9UBI9 543 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 MBD1Q9UIS9 605 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 WASF2Q9Y6W5 498 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 ALOX15BO15296 676 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 IL1BP01584 269 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 CCNCP24863 283 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 GKP32189 559 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 SLC8A1P32418 973 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 P2RY2P41231 377 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 CCNHP51946 323 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-204ENST00000463908 ZBTB16Q05516 673 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 RFTN1Q14699 578 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-204ENST00000463908 RPS6KA1Q15418 735 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 CST6Q15828 149 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 MYLK3Q32MK0 819 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 ARSIQ5FYB1 569 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 B4GALNT4Q76KP1 1039 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 TSEN2Q8NCE0 465 aaKnown RBP19.24■□□□□ 0.67
LMNB1-204ENST00000463908 TMIEQ8NEW7 156 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 OR2AP1Q8NGE2 309 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 GAB3Q8WWW8 586 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 OR8D1Q8WZ84 308 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 ZNF419Q96HQ0 510 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-204ENST00000463908 ALS2CR12Q96Q35 445 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 IRF2BPLQ9H1B7 796 aa19.24■□□□□ 0.67
LMNB1-204ENST00000463908 MATN3O15232 486 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 MID1O15344 667 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 INSIG1O15503 277 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 GFRA3O60609 400 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 RNASEH1O60930 286 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 RPP40O75818 363 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 IGLV3-19P01714 112 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 MX2P20592 715 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 BCKDHBP21953 392 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 TGM2P21980 687 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 CNR2P34972 360 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 RECQLP46063 649 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 NR2C2P49116 596 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 RHOAP61586 193 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 SNRPD1P62314 119 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 PPIDQ08752 370 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 LBRQ14739 615 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 FAM182AQ5T1J6 154 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 PGBD5Q8N414 524 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 AADATQ8N5Z0 425 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 TEX26Q8N6G2 289 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 OR6K2Q8NGY2 324 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 PIP4K2CQ8TBX8 421 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 MAML1Q92585 1016 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 FATE1Q969F0 183 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 HDAC11Q96DB2 347 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 EXOC2Q96KP1 924 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 NSMCE3Q96MG7 304 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 PSKH2Q96QS6 385 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 HEPHQ9BQS7 1158 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 PABPC3Q9H361 631 aaKnown RBP19.23■□□□□ 0.67
LMNB1-204ENST00000463908 SERGEFQ9UGK8 458 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 IL36AQ9UHA7 158 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 CYP8B1Q9UNU6 501 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 FAM186AA6NE01 2351 aa19.23■□□□□ 0.67
LMNB1-204ENST00000463908 DCHS1Q96JQ0 3298 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 PTPRZ1P23471 2315 aaPredicted RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 RIF1Q5UIP0 2472 aaKnown RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 IGHV1OR15-9A0A0B4J2B8 117 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 ZNF217O75362 1048 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 LEFTY1O75610 366 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 GJB3O75712 270 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 POP4O95707 220 aaKnown RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 DNTTP04053 509 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 ACADMP11310 421 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 NBL1P41271 181 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 PSMD8P48556 350 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 NSUN2Q08J23 767 aaKnown RBP eCLIP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 HNRNPDQ14103 355 aaKnown RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 TMCO4Q5TGY1 634 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 CCNYQ8ND76 341 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 CCDC114Q96M63 670 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 SEPT3Q9UH03 358 aa19.22■□□□□ 0.67
LMNB1-204ENST00000463908 EVLQ9UI08 416 aaPredicted RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 FARP1Q9Y4F1 1045 aaPredicted RBP19.22■□□□□ 0.67
LMNB1-204ENST00000463908 EML5Q05BV3 1969 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 TCRBV7S2A1N4TA0A589 114 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 TTC24A2A3L6 582 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-204ENST00000463908 PLK4O00444 970 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 C5AR1P21730 350 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 DRD3P35462 400 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 PDK1Q15118 436 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 POM121L1PQ3SYA9 428 aa19.21■□□□□ 0.67
LMNB1-204ENST00000463908 ZNF569Q5MCW4 686 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms