RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CDK10Q15131 360 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SF3B3Q15393 1217 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ST3GAL2Q16842 350 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ALKBH5Q6P6C2 394 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 DENND5BQ6ZUT9 1274 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ADAMTSL2Q86TH1 951 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NT5DC3Q86UY8 548 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LRRTM3Q86VH5 581 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PHC2Q8IXK0 858 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MB21D2Q8IYB1 491 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IFNL2Q8IZJ0 200 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 DEFB107AQ8IZN7 70 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SYCE1Q8N0S2 351 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LRRC47Q8N1G4 583 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZCCHC7Q8N3Z6 543 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FAM47BQ8NA70 645 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GIMAP8Q8ND71 665 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GLIS3Q8NEA6 775 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ADCY4Q8NFM4 1077 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 OR2T3Q8NH03 318 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PSMA8Q8TAA3 256 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IPCEF1Q8WWN9 437 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LPGAT1Q92604 370 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 JADE3Q92613 823 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 DHX38Q92620 1227 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ART4Q93070 314 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TOE1Q96GM8 510 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MAGED4Q96JG8 741 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 AK8Q96MA6 479 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 OSBPL11Q9BXB4 747 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM15Q9C019 465 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 HMG20AQ9NP66 347 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KMT5AQ9NQR1 393 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KCNQ5Q9NR82 932 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PKD2L2Q9NZM6 624 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 XPO7Q9UIA9 1087 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NUDT5Q9UKK9 219 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PCOLCE2Q9UKZ9 415 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SNX7Q9UNH6 387 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SCAF8Q9UPN6 1271 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 POMPQ9Y244 141 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 B3GNT3Q9Y2A9 372 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SF3B1O75533 1304 aaKnown RBP eCLIP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 A0A0G2JMP0 313 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC194A0A1B0GVG4 234 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 C16orf96A6NNT2 1141 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 EVPLLA8MZ36 301 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PLK4O00444 970 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PIK3R2O00459 728 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 YKT6O15498 198 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NUPL2O15504 423 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PDPK1O15530 556 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NOS1APO75052 506 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CPNE3O75131 537 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SPAG6O75602 509 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RFPL2O75678 378 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM16O95361 564 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PTPN1P18031 435 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CD9P21926 228 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TGM1P22735 817 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CCNE1P24864 410 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RBL1P28749 1068 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CHRNA3P32297 505 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GRIA1P42261 906 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ITGA8P53708 1063 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KRT17Q04695 432 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ENPEPQ07075 957 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TFCP2Q12800 502 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PLD1Q13393 1074 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NFIXQ14938 502 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ACAP2Q15057 778 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MAN2A1Q16706 1144 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM67Q5HYA8 995 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TOR2AQ5JU69 321 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PM20D1Q6GTS8 502 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 INTS5Q6P9B9 1019 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TTC33Q6PID6 262 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KYAT3Q6YP21 454 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SV2AQ7L0J3 742 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CHST15Q7LFX5 561 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PTAR1Q7Z6K3 402 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TRABD2AQ86V40 505 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 METTL23Q86XA0 190 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ARID3BQ8IVW6 561 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 BBS7Q8IWZ6 715 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 EID3Q8N140 333 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 AFAP1L2Q8N4X5 818 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RNF148Q8N7C7 305 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC89Q8N998 374 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GALNT11Q8NCW6 608 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ST13P5Q8NFI4 369 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 BPIFB6Q8NFQ5 453 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GRPEL2Q8TAA5 225 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GTF3C2Q8WUA4 911 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FBXW5Q969U6 566 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGEF26Q96DR7 871 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SIPA1Q96FS4 1042 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MSANTD3Q96H12 275 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms