RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ALPPL2P10696 532 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 VAV1P15498 845 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 CA4P22748 312 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ITGB7P26010 798 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 SERPINA4P29622 427 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 MIPP30301 263 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 MAT2AP31153 395 aaKnown RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 GRK6P43250 576 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 IRAK1P51617 712 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 SIM1P81133 766 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ELP6Q0PNE2 266 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 CNTN1Q12860 1018 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 FOXC1Q12948 553 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 PTP4A2Q12974 167 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 MMRN1Q13201 1228 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 HLA-BQ31612 363 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 INO80DQ53TQ3 878 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 RFX8Q6ZV50 586 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 TRIM69Q86WT6 500 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 DNAAF5Q86Y56 855 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ATPAF2Q8N5M1 289 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 OR2AP1Q8NGE2 309 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF564Q8TBZ8 553 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 RHBDD1Q8TEB9 315 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 FRS2Q8WU20 508 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 MYO19Q96H55 970 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 MAK16Q9BXY0 300 aaKnown RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 HDAC8Q9BY41 377 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ATP13A3Q9H7F0 1226 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 TM7SF3Q9NS93 570 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 UVRAGQ9P2Y5 699 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 EP300Q09472 2414 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ATG2BQ96BY7 2078 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 MYOFQ9NZM1 2061 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TMEM191CA6NGB0 347 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 FPGTO14772 594 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 VILLO15195 856 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TSPAN6O43657 245 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TMCC1O94876 653 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PTMAP06454 111 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ADRB1P08588 477 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF883P0CG24 379 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ACVRL1P37023 503 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 HSPA9P38646 679 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 SUOXP51687 545 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 NAP1L1P55209 391 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 POLR2LP62875 67 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 RFTN1Q14699 578 aaPredicted RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 SMTNL2Q2TAL5 461 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF805Q5CZA5 627 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 GDPD4Q6W3E5 623 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 DPY19L3Q6ZPD9 716 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 BNIPLQ7Z465 357 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PTAR1Q7Z6K3 402 aaPredicted RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TTC7BQ86TV6 843 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 HORMAD1Q86X24 394 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PLPP6Q8IY26 295 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PYROXD2Q8N2H3 581 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 AADATQ8N5Z0 425 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 OR2A12Q8NGT7 310 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ATL2Q8NHH9 583 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ALG14Q96F25 216 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 HMCESQ96FZ2 354 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 SLC6A18Q96N87 628 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 FAM129BQ96TA1 746 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PSMB7Q99436 277 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 FERMT1Q9BQL6 677 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 SNRNP25Q9BV90 132 aaKnown RBP9.1□□□□□ -0.95
DDX39B-216ENST00000462421 CALN1Q9BXU9 219 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 TTYH3Q9C0H2 523 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 THAP2Q9H0W7 228 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 ISCUQ9H1K1 167 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 FSCN3Q9NQT6 498 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 RXFP3Q9NSD7 469 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 GPATCH2LQ9NWQ4 482 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 FTSJ1Q9UET6 329 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 PCDHGB2Q9Y5G2 931 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 OR51B4Q9Y5P0 310 aa9.1□□□□□ -0.95
DDX39B-216ENST00000462421 GVINP1Q7Z2Y8 2422 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 A0A1W2PQ67 120 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 A0A1W2PQU0 124 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 SSU72P8A0A1W2PR75 194 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 A6NNZ2 444 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 TMEM110-MUSTN1A8MSY1 372 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 WASH4PA8MWX3 477 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 UPK3BL1B0FP48 263 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 UPK3BL2E5RIL1 263 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 K7ERQ8 282 aa9.09□□□□□ -0.95
DDX39B-216ENST00000462421 TLR4O00206 839 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms