RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RRP1BQ14684 758 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 STXBP5Q5T5C0 1151 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TMC3Q7Z5M5 1100 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 RNF148Q8N7C7 305 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZDHHC15Q96MV8 337 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 OSGEPQ9NPF4 335 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SEMA4BQ9NPR2 832 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 GPRC5CQ9NQ84 441 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 RBMXL2O75526 392 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SERPINB7O75635 380 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MICAL2O94851 1124 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CSH1P0DML2 217 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CSH2P0DML3 217 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 AMD1P17707 334 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 EPORP19235 508 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 OGNP20774 298 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PPIBP23284 216 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 KLRC2P26717 231 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ADSLP30566 484 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 GMPSP49915 693 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ALDH3A2P51648 485 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PRKAG1P54619 331 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SLC15A2Q16348 729 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PCID2Q5JVF3 399 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 FBXL19Q6PCT2 694 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CCDC80Q76M96 950 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PSMA8Q8TAA3 256 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SUSD6Q92537 303 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 KAT5Q92993 513 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MTFMTQ96DP5 389 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CHCHD6Q9BRQ6 235 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 IL22Q9GZX6 179 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SPAG4Q9NPE6 437 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MARK1Q9P0L2 795 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CASTOR2A6NHX0 329 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ARHGEF33A8MVX0 844 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PSMD11O00231 422 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 MDM4O15151 490 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 DHFRP00374 187 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 CYP2C18P33260 490 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 TUFMP49411 452 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 FAAP100Q0VG06 881 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PEX6Q13608 980 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 LSM12Q3MHD2 195 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 THOC7Q6I9Y2 204 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF720Q7Z2F6 126 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 BRSK2Q8IWQ3 736 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZCCHC9Q8N567 271 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 HASPINQ8TF76 798 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 EDEM1Q92611 657 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF607Q96SK3 696 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ATXN3LQ9H3M9 355 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 ETAA1Q9NY74 926 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 SCAF8Q9UPN6 1271 aaKnown RBP9.09□□□□□ -0.95
BRCA1-205ENST00000461221 PCDHGA3Q9Y5H0 932 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 COMMD3-BMI1R4GMX3 469 aa9.09□□□□□ -0.95
BRCA1-205ENST00000461221 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 GTPBP1O00178 669 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MAGEC1O60732 1142 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CBFA2T3O75081 653 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PECAM1P16284 738 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.967e-6■■■□□ 18.9
BRCA1-205ENST00000461221 CLCN5P51795 746 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ITGB3BPQ13352 177 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ZMYND11Q15326 602 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 USP41Q3LFD5 358 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ANXA8L1Q5VT79 327 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PGM2Q96G03 612 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 BHLHE41Q9C0J9 482 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 DEFB129Q9H1M3 183 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CCDC177Q9NQR7 707 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 NECTIN3Q9NQS3 549 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 STARD7Q9NQZ5 370 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PNPLA3Q9NST1 481 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 WBP11Q9Y2W2 641 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SHROOM2Q13796 1616 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 IQCMA0A1B0GVH7 501 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 KPNA3O00505 521 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PSIP1O75475 530 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 OR5F1O95221 314 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 VIL1P09327 827 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 NR2F6P10588 404 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 FGFR3P22607 806 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 AMPD1P23109 780 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 S100A1P23297 94 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MMP14P50281 582 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 NDST1P52848 882 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PKNOX1P55347 436 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SLC6A3Q01959 620 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 LAMTOR4Q0VGL1 99 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 GALNT3Q14435 633 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 NRF1Q16656 503 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms