RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 RAB6CQ53S08 254 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 CT47A1Q5JQC4 288 aaPredicted RBP8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 HES3Q5TGS1 186 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 SEL1L3Q68CR1 1132 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 RETSATQ6NUM9 610 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 GCNT7Q6ZNI0 430 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 ZNF677Q86XU0 584 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 DRC7Q8IY82 874 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 EMC1Q8N766 993 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 MSANTD4Q8NCY6 345 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 OR13H1Q8NG92 308 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 NXPE2Q96DL1 559 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 PPP1R16AQ96I34 528 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 LRIG1Q96JA1 1093 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 CEP44Q9C0F1 390 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 RAB6CQ9H0N0 254 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 NUP62CLQ9H1M0 184 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 GANQ9H2C0 597 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 ATP13A1Q9HD20 1204 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 FZD3Q9NPG1 666 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 DYRK4Q9NR20 520 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 METTL5Q9NRN9 209 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 KLHL11Q9NVR0 708 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 UCKL1Q9NWZ5 548 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 TAB2Q9NYJ8 693 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 PPARGC1AQ9UBK2 798 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 NYNRINQ9P2P1 1898 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-202ENST00000461063 KALRNO60229 2985 aa8.96□□□□□ -0.97
SOX2-OT-202ENST00000461063 FAM72CH0Y354 149 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 GFPT2O94808 682 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 PCDH8O95206 1070 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CD160O95971 181 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CYP1A1P04798 512 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CHRNB2P17787 502 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 HNRNPA2B1P22626 353 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ACP1P24666 158 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ITGB7P26010 798 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ADRA1BP35368 520 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ACVRL1P37023 503 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 KLK7P49862 253 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 DNA2P51530 1060 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 NEK3P51956 506 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CDR2Q01850 454 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ZNF211Q13398 564 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 RTP5Q14D33 572 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 C15orf59Q2T9L4 293 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CCDC14Q49A88 953 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 SOWAHCQ53LP3 525 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CARD16Q5EG05 197 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 FAM72AQ5TYM5 149 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 MANEALQ5VSG8 457 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CDKAL1Q5VV42 579 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 FAM72DQ6L9T8 149 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ABI3BPQ7Z7G0 1075 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 PHLDB2Q86SQ0 1253 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 FAM72BQ86X60 149 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 SLC22A18ASQ8N1D0 253 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 PCDH20Q8N6Y1 951 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 OR4C6Q8NH72 309 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 RXFP2Q8WXD0 754 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 RFFLQ8WZ73 363 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 HEPHQ9BQS7 1158 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CALN1Q9BXU9 219 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 MAGEB5Q9BZ81 275 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 VPS16Q9H269 839 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 CAAP1Q9H8G2 361 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 OR12D3Q9UGF7 316 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.98
SOX2-OT-202ENST00000461063 ADAMTS20P59510 1910 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 GCN1Q92616 2671 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 CXorf51AA0A1B0GTR3 108 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 C2CD4BA6NLJ0 364 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 A6NNZ2 444 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 EPHB6O15197 1021 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 FFAR2O15552 330 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 PIAS2O75928 621 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 GJB6O95452 261 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 GIMD1P0DJR0 217 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 ADRB3P13945 408 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 RHOQP17081 205 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 L1CAMP32004 1257 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 SOX5P35711 763 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 CCNHP51946 323 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 JAM2P57087 298 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 RPS21P63220 83 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 INSM1Q01101 510 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 FMO1Q01740 532 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 NRG1Q02297 640 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 SEMG2Q02383 582 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 PTP4A2Q12974 167 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 FGL2Q14314 439 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 KRT31Q15323 416 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 CDO1Q16878 200 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 ARL13BQ3SXY8 428 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 ZNF542PQ5EBM4 170 aa8.95□□□□□ -0.98
SOX2-OT-202ENST00000461063 KIAA1161Q6NSJ0 714 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms