RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SQORQ9Y6N5 450 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 FAM95CA0A1B0GW59 222 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 MYBPHLA2RUH7 354 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ARL5CA6NH57 179 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FAM72CH0Y354 149 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 M0QZQ0 153 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 INPPL1O15357 1258 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SMIM24O75264 130 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 HSPA1AP0DMV8 641 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 HSPA1BP0DMV9 641 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 PAX7P23759 505 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 PIK3R1P27986 724 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 PAPOLAP51003 745 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 APLP1P51693 650 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 CACNA2D1P54289 1103 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 PITX1P78337 314 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 NKX3-2P78367 333 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SLC25A3Q00325 362 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 TNK2Q07912 1038 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 STX5Q13190 355 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 TUSC3Q13454 348 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 BTG3Q14201 252 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 GRM3Q14832 879 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SLC14A2Q15849 920 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 UPP1Q16831 310 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SPATS1Q496A3 300 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 CERCAMQ5T4B2 595 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FAM72AQ5TYM5 149 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 MANEALQ5VSG8 457 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 AFMIDQ63HM1 303 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FAM72DQ6L9T8 149 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 RWDD4Q6NW29 188 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 MSANTD2Q6P1R3 559 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 BHLHA9Q7RTU4 235 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 TMC7Q7Z402 723 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 KBTBD6Q86V97 674 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FAM72BQ86X60 149 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 PDSS2Q86YH6 399 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SPATA2LQ8IUW3 424 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 DCP1BQ8IZD4 617 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 RTL3Q8N8U3 475 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ARRDC4Q8NCT1 418 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ICA1LQ8NDH6 482 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 GSTCDQ8NEC7 633 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 CEP70Q8NHQ1 597 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 LRRN4Q8WUT4 740 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FUBP3Q96I24 572 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 GAD1Q99259 594 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 AGAP2Q99490 1192 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SENP6Q9GZR1 1112 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 SLC25A51Q9H1U9 297 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 FBXO44Q9H4M3 255 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 CHRAC1Q9NRG0 131 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 OLA1Q9NTK5 396 aaKnown RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 CLIC5Q9NZA1 410 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ST3GAL5Q9UNP4 418 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 ASB3Q9Y575 518 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 WASF2Q9Y6W5 498 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 KAT6AQ92794 2004 aa8.96□□□□□ -0.98
HDAC3-202ENST00000459727 DPPA5A6NC42 116 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 MEI4A8MW99 385 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 F5H423 210 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 H0YJX3 145 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 DFFAO00273 331 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SLC7A4O43246 635 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ADCY6O43306 1168 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 MAFKO60675 156 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 USP12O75317 370 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PIGNO95427 931 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 TOP3BO95985 862 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 LINGO3P0C6S8 592 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SLC35E2BP0CK96 405 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 UQCRBP14927 111 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 TFEBP19484 476 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 NMBRP28336 390 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ADRA1AP35348 466 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 PSMD8P48556 350 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 NUDT2P50583 147 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ATP4BP51164 291 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SCNN1GP51170 649 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 CLCNKBP51801 687 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 EPHB1P54762 984 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 INHBEP58166 350 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 DYNC1I2Q13409 638 aaKnown RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ART3Q13508 389 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 EIF4EBP2Q13542 120 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 CCNIQ14094 377 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SQLEQ14534 574 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 NFE2Q16621 373 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 ARL13AQ5H913 290 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-202ENST00000459727 KIAA0319Q5VV43 1072 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 IRAK1BP1Q5VVH5 260 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 OVOS1Q6IE37 1185 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 OR52E8Q6IFG1 317 aa8.95□□□□□ -0.98
HDAC3-202ENST00000459727 SLC30A9Q6PML9 568 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms