RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 BCCIPQ9P287 314 aaKnown RBP eCLIP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 TCRBV9S1A1TA0A576 114 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 AGTP01019 485 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 PGAM1P18669 254 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 MZF1P28698 734 aaPredicted RBP24.8■■□□□ 1.56
U2AF1-204ENST00000459639 CSKP41240 450 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 DSC2Q02487 901 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 NIPAL4Q0D2K0 466 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 RARS2Q5T160 578 aaKnown RBP24.8■■□□□ 1.56
U2AF1-204ENST00000459639 FYB2Q5VWT5 728 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 POTEHQ6S545 545 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 FIBINQ8TAL6 211 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 ARRDC2Q8TBH0 407 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 BHMTQ93088 406 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 TADA1Q96BN2 335 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 ALG14Q96F25 216 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 PSKH2Q96QS6 385 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 MGME1Q9BQP7 344 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 CINPQ9BW66 212 aaPredicted RBP24.8■■□□□ 1.56
U2AF1-204ENST00000459639 FSD1LQ9BXM9 530 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 PLAC1Q9HBJ0 212 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 LGALS13Q9UHV8 139 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 SLC24A2Q9UI40 661 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 VPS28Q9UK41 221 aa24.8■■□□□ 1.56
U2AF1-204ENST00000459639 GLP2RO95838 553 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 MMP2P08253 660 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 CBX1P83916 185 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 ARF5P84085 180 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 HYAL1Q12794 435 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 CBX2Q14781 532 aaPredicted RBP24.79■■□□□ 1.56
U2AF1-204ENST00000459639 RASA2Q15283 850 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 TNFAIP8L3Q5GJ75 292 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 CASC4Q6P4E1 433 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 GPR149Q86SP6 731 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 SH2D3CQ8N5H7 860 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 CELF5Q8N6W0 485 aaKnown RBP24.79■■□□□ 1.56
U2AF1-204ENST00000459639 EFHBQ8N7U6 833 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 GSDMBQ8TAX9 411 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 MRGPRX2Q96LB1 330 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 CYTH2Q99418 400 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 FICDQ9BVA6 458 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 EURLQ9NYK6 297 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 SAMD15Q9P1V8 674 aa24.79■■□□□ 1.56
U2AF1-204ENST00000459639 PMPCBO75439 489 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 ZMPSTE24O75844 475 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 CD86P42081 329 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 GEMIN4P57678 1058 aaKnown RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 SLC14A2Q15849 920 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 FAM76AQ8TAV0 307 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 APOL2Q9BQE5 337 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 IL22Q9GZX6 179 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 KIAA1522Q9P206 1035 aaPredicted RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 NOVA2Q9UNW9 492 aaKnown RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 SLC9A3R1O14745 358 aaPredicted RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 PENKP01210 267 aaPredicted RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 FSHRP23945 695 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 GCAP28676 217 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 ATP5DP30049 168 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 NUMBP49757 651 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 WNT3AP56704 352 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 CRADDP78560 199 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 TCEAL5Q5H9L2 206 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 SEMA3CQ99985 751 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 C2orf49Q9BVC5 232 aaPredicted RBP24.78■■□□□ 1.56
U2AF1-204ENST00000459639 PLK2Q9NYY3 685 aa24.78■■□□□ 1.56
U2AF1-204ENST00000459639 MYLKQ15746 1914 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 MUSKO15146 869 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 SNAP91O60641 907 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 PRKCHP24723 683 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 SKOR1P84550 965 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 SLC12A1Q13621 1099 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 RANBP10Q6VN20 620 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 CYS1Q717R9 158 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 NPAS3Q8IXF0 933 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 ZNF557Q8N988 423 aaPredicted RBP24.77■■□□□ 1.56
U2AF1-204ENST00000459639 VPS51Q9UID3 782 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 ACTL7AQ9Y615 435 aa24.77■■□□□ 1.56
U2AF1-204ENST00000459639 POC1B-GALNT4F8VUJ3 575 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 LMAN2Q12907 356 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 INO80DQ53TQ3 878 aaPredicted RBP24.76■■□□□ 1.55
U2AF1-204ENST00000459639 DENND5AQ6IQ26 1287 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 ANKRD54Q6NXT1 300 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 IRF7Q92985 503 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 ACDQ96AP0 544 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 DHRS4Q9BTZ2 278 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 SPHK2Q9NRA0 654 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 CTNNAL1Q9UBT7 734 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 MYOFQ9NZM1 2061 aa24.76■■□□□ 1.55
U2AF1-204ENST00000459639 MAGEB16A2A368 324 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CD160O95971 181 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 C1QAP02745 245 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 POLBP06746 335 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CES1P23141 567 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 PLK1P53350 603 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 MAGOHP61326 146 aaKnown RBP24.75■■□□□ 1.55
U2AF1-204ENST00000459639 EFTUD2Q15029 972 aaKnown RBP eCLIP24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CYTH1Q15438 398 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 ARMC3Q5W041 872 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 TMEM25Q86YD3 366 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 PAFAH2Q99487 392 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms