RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CFAP99D6REC4 459 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 THAP12O43422 761 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 MT-CO1P00395 513 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 RHOCP08134 193 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 TGM2P21980 687 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 NME3Q13232 169 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 PDCLQ13371 301 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 CDKN3Q16667 212 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 EFHC1Q5JVL4 640 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 SEL1L3Q68CR1 1132 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 OR6B2Q6IFH4 312 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 SMARCE1Q969G3 411 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 MED8Q96G25 268 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 SLC46A1Q96NT5 459 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 SLC2A13Q96QE2 648 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 HDAC8Q9BY41 377 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 ASNSD1Q9NWL6 643 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 IL36AQ9UHA7 158 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 ZFR2Q9UPR6 939 aaKnown RBP14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 ZDHHC9Q9Y397 364 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 HS3ST4Q9Y661 456 aa14.67□□□□□ -0.06
UPF3AP2-201ENST00000457924 K7ERQ8 282 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 SNAP91O60641 907 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 HSF2BPO75031 334 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 PAGE1O75459 146 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 CSF2P04141 144 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 NME1P15531 152 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 GNA15P30679 374 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 RECQLP46063 649 aaPredicted RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 RPS21P63220 83 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 C5orf22Q49AR2 442 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 TMEM259Q4ZIN3 620 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 KYAT3Q6YP21 454 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 RBM44Q6ZP01 1051 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 EFL1Q7Z2Z2 1120 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 PARGQ86W56 976 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 CHST14Q8NCH0 376 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 ZNF548Q8NEK5 533 aaPredicted RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 TPCN2Q8NHX9 752 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 GRIN3AQ8TCU5 1115 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 ATXN7L3BQ96GX2 97 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 BMFQ96LC9 184 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 PSMB7Q99436 277 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 SLC17A9Q9BYT1 436 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 UBE2TQ9NPD8 197 aaPredicted RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 IPO11Q9UI26 975 aaKnown RBP14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 VPS51Q9UID3 782 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 PCDHGA8Q9Y5G5 932 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 CSNK1G3Q9Y6M4 447 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 ATMQ13315 3056 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 TENM4Q6N022 2769 aa14.66□□□□□ -0.06
UPF3AP2-201ENST00000457924 SPTY2D1-AS1A0A0U1RR47 76 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 K7ENP7 123 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 SLC28A2O43868 658 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 GRAP2O75791 330 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 JUNDP17535 347 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 RRM1P23921 792 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 PPP1R2P41236 205 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 RABIFP47224 123 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 NEK3P51956 506 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 FZD2Q14332 565 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 KIAA1614Q5VZ46 1190 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 KIAA1161Q6NSJ0 714 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 GUSBP11Q6P575 273 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 INO80CQ6PI98 192 aaPredicted RBP14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 CCDC81Q6ZN84 652 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 C14orf80Q86SX3 495 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 FMR1NBQ8N0W7 255 aaPredicted RBP14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 SPATA20Q8TB22 786 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 FEM1CQ96JP0 617 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 PPP1R13BQ96KQ4 1090 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 INTS2Q9H0H0 1204 aaKnown RBP14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 GPR27Q9NS67 375 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 SALL4Q9UJQ4 1053 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 ENTPD2Q9Y5L3 495 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 COL27A1Q8IZC6 1860 aaPredicted RBP14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 MYO18BQ8IUG5 2567 aa14.65□□□□□ -0.06
UPF3AP2-201ENST00000457924 A0A1W2PNU3 283 aaPredicted RBP14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 EME2A4GXA9 379 aaPredicted RBP14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 POM121BA6NF01 834 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 PYCARD-AS1I3L0S3 204 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 M0QYT0 321 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 RNF103O00237 685 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 AQP9O43315 295 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 SMAD6O43541 496 aaKnown RBP14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 LEFTY1O75610 366 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 TCEA3O75764 348 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 CNTN5O94779 1100 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 PAK4O96013 591 aaPredicted RBP14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 ADRB3P13945 408 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 SKOR1P84550 965 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 PDE1CQ14123 709 aaPredicted RBP14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 NR0B2Q15466 257 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 DEFB133Q30KQ1 61 aa14.64□□□□□ -0.07
UPF3AP2-201ENST00000457924 ALFQ53S48 1182 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms