RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 VITQ6UXI7 678 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 Q7L0L9 218 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 HDXQ7Z353 690 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 HOOK3Q86VS8 718 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 LZTR1Q8N653 840 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TTC8Q8TAM2 541 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TADA1Q96BN2 335 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TMA16Q96EY4 203 aaKnown RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 MSLNLQ96KJ4 702 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MRGPRX2Q96LB1 330 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 CDCA3Q99618 268 aaPredicted RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 FICDQ9BVA6 458 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MTG2Q9H4K7 406 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SP110Q9HB58 689 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SYBUQ9NX95 663 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 TTLL3Q9Y4R7 772 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TEX264Q9Y6I9 313 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 ILVBLA1L0T0 632 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CCDC78A2IDD5 438 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ARHGAP42A6NI28 874 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 HEPACAM2A8MVW5 462 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CXorf49A8MYA2 514 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 NEDD8-MDP1E9PL57 170 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CBX4O00257 560 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ALOX15BO15296 676 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 NCAM2O15394 837 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 UGT1A9O60656 530 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ZNF821O75541 412 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 TCF3P15923 654 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 PFKLP17858 780 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CR2P20023 1033 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 DDX6P26196 483 aaKnown RBP eCLIP8.88□□□□□ -0.99
RIF1-208ENST00000457745 GKP32189 559 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 OXCT1P55809 520 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 SESN2P58004 480 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 YBEYP58557 167 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 ZNF177Q13360 481 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 GRM2Q14416 872 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 HIF1AQ16665 826 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 EML3Q32P44 896 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 LRIT3Q3SXY7 679 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 PARP15Q460N3 678 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CERCAMQ5T4B2 595 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ATXN7L2Q5T6C5 722 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 TRMT10BQ6PF06 316 aaKnown RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 PARM1Q6UWI2 310 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 KDELC2Q7Z4H8 507 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ZBED8Q8IZ13 594 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 NAT16Q8N8M0 369 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 PNPLA1Q8N8W4 532 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 MCUQ8NE86 351 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 FBXO36Q8NEA4 188 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 IPMKQ8NFU5 416 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 DDI1Q8WTU0 396 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 SORCS1Q8WY21 1168 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 IMP4Q96G21 291 aaKnown RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 ZNF778Q96MU6 729 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 FCRL3Q96P31 734 aaPredicted RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 FCRL5Q96RD9 977 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 SH3GL2Q99962 352 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 KXD1Q9BQD3 176 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 FEM1AQ9BSK4 669 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 MAGEH1Q9H213 219 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 PABPC3Q9H361 631 aaKnown RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 UGT1A7Q9HAW7 530 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 UGT1A10Q9HAW8 530 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 UGT1A8Q9HAW9 530 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 ATP13A1Q9HD20 1204 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CASS4Q9NQ75 786 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 CLDND1Q9NY35 253 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 EURLQ9NYK6 297 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 IL1RAPL1Q9NZN1 696 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 MTRF1LQ9UGC7 380 aaKnown RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 HCN2Q9UL51 889 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 TCF20Q9UGU0 1960 aaKnown RBP8.88□□□□□ -0.99
RIF1-208ENST00000457745 TICRRQ7Z2Z1 1910 aa8.88□□□□□ -0.99
RIF1-208ENST00000457745 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 H0Y626 953 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 H3BQ06 376 aaPredicted RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 PMPCBO75439 489 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 TMCC1O94876 653 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 SUN1O94901 812 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 FGF19O95750 216 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 AP2A1O95782 977 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 TTC4O95801 387 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 PRLP01236 227 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 NUDT17P0C025 328 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CISD3P0C7P0 127 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 ATXN1LP0C7T5 689 aaKnown RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 FDFT1P37268 417 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms