RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 C6orf118Q5T5N4 469 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 OR2A12Q8NGT7 310 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 VCPIP1Q96JH7 1222 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 MCEEQ96PE7 176 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 SPON2Q9BUD6 331 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.21□□□□□ -0.29
TREX1-203ENST00000456089 MAGEB5Q9BZ81 275 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 HS3ST2Q9Y278 367 aa13.21□□□□□ -0.29
TREX1-203ENST00000456089 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.29
TREX1-203ENST00000456089 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
TREX1-203ENST00000456089 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 A0A1W2PQU0 124 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 DRGXA6NNA5 263 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 OR1E1P30953 314 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
TREX1-203ENST00000456089 STAT4Q14765 748 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 SLC45A4Q5BKX6 768 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 RWDD4Q6NW29 188 aaKnown RBP13.2□□□□□ -0.3
TREX1-203ENST00000456089 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 KANSL1Q7Z3B3 1105 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 SETD3Q86TU7 594 aaPredicted RBP13.2□□□□□ -0.3
TREX1-203ENST00000456089 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 GALNT15Q8N3T1 639 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 CRELD1Q96HD1 420 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 C2orf49Q9BVC5 232 aaPredicted RBP13.2□□□□□ -0.3
TREX1-203ENST00000456089 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
TREX1-203ENST00000456089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.3
TREX1-203ENST00000456089 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 KNTC1P50748 2209 aa13.2□□□□□ -0.3
TREX1-203ENST00000456089 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ALOX15BO15296 676 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 SLC7A4O43246 635 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ZNF821O75541 412 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 FTLP02792 175 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 GZMAP12544 262 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 SKILP12757 684 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ADRA1BP35368 520 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 PRKCIP41743 596 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ARRB1P49407 418 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 ACADVLP49748 655 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 DNA2P51530 1060 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 CLDN2P57739 230 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 SETMARQ53H47 684 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 LEKR1Q6ZMV7 388 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 DPY19L3Q6ZPD9 716 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ZNF571Q7Z3V5 609 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 BNIPLQ7Z465 357 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 SLFN11Q7Z7L1 901 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 DCAF4L2Q8NA75 395 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 TRIM11Q96F44 468 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ZNF212Q9UDV6 495 aa13.19□□□□□ -0.3
TREX1-203ENST00000456089 ZFR2Q9UPR6 939 aaKnown RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
TREX1-203ENST00000456089 BPTFQ12830 3046 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 IGLV3-10A0A075B6K4 115 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 PRAMEF26H0Y7S4 382 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 TRIM38O00635 465 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 LEFTY1O75610 366 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 RFPL3O75679 317 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 PCDH8O95206 1070 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 TPM1P09493 284 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 THEGLP0DJG4 465 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 MYBL1P10243 752 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 MYF5P13349 255 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 GKP32189 559 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 ACVRL1P37023 503 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 ZBED6P86452 979 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 ZNF284Q2VY69 593 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 KDM7AQ6ZMT4 941 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 OR13H1Q8NG92 308 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 OR6K2Q8NGY2 324 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms