RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 C22orf39Q6P5X5 142 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 LINGO4Q6UY18 593 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 ZNF852Q6ZMS4 543 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 TPRG1Q6ZUI0 275 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 B4GALNT4Q76KP1 1039 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 GSTA5Q7RTV2 222 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 PGBD5Q8N414 524 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 ATP11CQ8NB49 1132 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 GLIS1Q8NBF1 620 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 ARRDC2Q8TBH0 407 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 VOPP1Q96AW1 172 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 IMP4Q96G21 291 aaKnown RBP11.43□□□□□ -0.58
TRAF4-206ENST00000454852 NUDCD1Q96RS6 583 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 GABRG3Q99928 467 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 CINPQ9BW66 212 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-206ENST00000454852 CIPCQ9C0C6 399 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 SLC25A51Q9H1U9 297 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 GBA3Q9H227 469 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 GLOD4Q9HC38 313 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 VPS45Q9NRW7 570 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 KLHL8Q9P2G9 620 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-206ENST00000454852 SLCO3A1Q9UIG8 710 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 SLC8A2Q9UPR5 921 aa11.43□□□□□ -0.58
TRAF4-206ENST00000454852 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
TRAF4-206ENST00000454852 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
TRAF4-206ENST00000454852 KRBA1A5PL33 1030 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ERI2A8K979 691 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 K7ERQ8 282 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 NDC80O14777 642 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 EGFP01133 1207 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 IFNB1P01574 187 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 FDFT1P37268 417 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 STK19P49842 368 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 NRLP54845 237 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 AP1S1P61966 158 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ZXDAP98168 799 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 SEMA5AQ13591 1074 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ZNF234Q14588 700 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 DLG2Q15700 870 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 DUPD1Q68J44 220 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ARHGEF18Q6ZSZ5 1173 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 PID1Q7Z2X4 250 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 SFTPA1Q8IWL2 248 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 TSEN2Q8NCE0 465 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 LRRN4CLQ8ND94 238 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 OR2AP1Q8NGE2 309 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 CCDC110Q8TBZ0 833 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 CYB5D2Q8WUJ1 264 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 SORCS1Q8WY21 1168 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 RUBCNQ92622 972 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 LRIG1Q96JA1 1093 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 RPL10LQ96L21 214 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 AGAP3Q96P47 875 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 GORASP1Q9BQQ3 440 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 LRRC1Q9BTT6 524 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 RAB17Q9H0T7 212 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 EIF2B3Q9NR50 452 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 SEPT10Q9P0V9 454 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 FCF1Q9Y324 198 aaKnown RBP11.42□□□□□ -0.58
TRAF4-206ENST00000454852 ACTL7AQ9Y615 435 aa11.42□□□□□ -0.58
TRAF4-206ENST00000454852 EDDM13A0A1B0GTR0 161 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 KANSL1LA0AUZ9 987 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 SMAPO00193 183 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 ALOX15BO15296 676 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 INSIG1O15503 277 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 ANXA9O76027 345 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 METTL18O95568 372 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 IGSF6O95976 241 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 MMP2P08253 660 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 CHRNB1P11230 501 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 ETS1P14921 441 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 NFKB1P19838 968 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 IL12RB1P42701 662 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 RGRP47804 291 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 RHOAP61586 193 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 CBLBQ13191 982 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 FZD5Q13467 585 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 LRRC32Q14392 662 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 GRM3Q14832 879 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 CARD16Q5EG05 197 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 EGFLAMQ63HQ2 1017 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 KCTD11Q693B1 232 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 CCDC70Q6NSX1 233 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 NCEH1Q6PIU2 408 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
TRAF4-206ENST00000454852 ZNF513Q8N8E2 541 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-206ENST00000454852 OR2A12Q8NGT7 310 aa11.41□□□□□ -0.58
TRAF4-206ENST00000454852 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms