RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 LCLAT1Q6UWP7 414 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 TTC30AQ86WT1 665 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CROCCP3Q8IVE0 287 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 DGCR6LQ9BY27 220 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CCDC68Q9H2F9 335 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CDHR5Q9HBB8 845 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SFMBT1Q9UHJ3 866 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ZBTB24O43167 697 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 STBD1O95210 358 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 BCL10O95999 233 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 PIGRP01833 764 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ALBP02768 609 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 PRDX6P30041 224 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SFSWAPQ12872 951 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 GRM2Q14416 872 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 KIZQ2M2Z5 673 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 TMEM26Q6ZUK4 368 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 NT5DC4Q86YG4 428 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ACVR1CQ8NER5 493 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 DNAJB14Q8TBM8 379 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 EDEM1Q92611 657 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 DPEP3Q9H4B8 488 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 MATN2O00339 956 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 HUS1O60921 280 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 H2AFYO75367 372 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CABYRO75952 493 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SNRPB2P08579 225 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ERCC2P18074 760 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CDK18Q07002 472 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 CXCL9Q07325 125 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 KCTD2Q14681 263 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ANKDD1AQ495B1 522 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SAMD4BQ5PRF9 694 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 ZNF534Q76KX8 674 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 BPIFB6Q8NFQ5 453 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 BEST2Q8NFU1 509 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 TMEM174Q8WUU8 243 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 EML4Q9HC35 981 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 GPRC5DQ9NZD1 345 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 DAPK2Q9UIK4 370 aa14.04□□□□□ -0.16
UBE2D3-210ENST00000453744 FKBP1AP62942 108 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 GNA12Q03113 381 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 UGP2Q16851 508 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 NCBP2-AS2Q69YL0 99 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 RBM12BQ8IXT5 1001 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 PNPLA1Q8N8W4 532 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 KLHL25Q9H0H3 589 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 GBA2Q9HCG7 927 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 MKS1Q9NXB0 559 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 ZNF229Q9UJW7 825 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 BCAS2O75934 225 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 GFAPP14136 432 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 PCYT1AP49585 367 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 FOXD4Q12950 439 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 ARL13BQ3SXY8 428 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 FBXO48Q5FWF7 155 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 EGFLAMQ63HQ2 1017 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 SHCBP1Q8NEM2 672 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 FICDQ9BVA6 458 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 ZNF696Q9H7X3 374 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 OXSMQ9NWU1 459 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 KIAA1257Q9ULG3 409 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 NHSQ6T4R5 1651 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 STRCP1A6NGW2 1772 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 C7orf72A4D263 438 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 TRIM43BA6NCK2 446 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 CDK9P50750 372 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 NSUN2Q08J23 767 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 PIGGQ5H8A4 983 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 NAPEPLDQ6IQ20 393 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 FNDC8Q8TC99 324 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 CEPT1Q9Y6K0 416 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 DGKBQ9Y6T7 804 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 ADGRA2Q96PE1 1338 aa14.03□□□□□ -0.16
UBE2D3-210ENST00000453744 MDM4O15151 490 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 PCNAP12004 261 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 AKAP5P24588 427 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 LSM3P62310 102 aaKnown RBP14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 PPHLN1Q8NEY8 458 aaKnown RBP14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 TCF12Q99081 682 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 ZNF408Q9H9D4 720 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 GMPR2Q9P2T1 348 aaKnown RBP14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 RIMS3Q9UJD0 308 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 SLC8A2Q9UPR5 921 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 SNX10Q9Y5X0 201 aa14.02□□□□□ -0.16
UBE2D3-210ENST00000453744 CLDN5O00501 218 aa14.02□□□□□ -0.17
UBE2D3-210ENST00000453744 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms