RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CCDC189A1A4V9 331 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 KLRG2A4D1S0 409 aaPredicted RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 PDZK1P1A8MUH7 402 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ACKR2O00590 384 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ITM2AO43736 263 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 METTL18O95568 372 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ABHD2P08910 425 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CYP3A7P24462 503 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PSMD7P51665 324 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PLD1Q13393 1074 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 OLIG2Q13516 323 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ANKS6Q68DC2 871 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PAOXQ6QHF9 649 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ZNF621Q6ZSS3 439 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 XYLT1Q86Y38 959 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 SAMD3Q8N6K7 520 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 TFAP2BQ92481 460 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ADAM2Q99965 735 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 STARD7Q9NQZ5 370 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 SLC38A7Q9NVC3 462 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PRKAG3Q9UGI9 489 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 RIMBP3CA6NJZ7 1639 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 RIMBP3BA6NNM3 1639 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 RIMBP3Q9UFD9 1639 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 MSI1O43347 362 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 GABRB2P47870 512 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 HK2P52789 917 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ROR2Q01974 943 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 BBS12Q6ZW61 710 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 FEM1CQ96JP0 617 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 TMEM106CQ9BVX2 250 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 EPB41L1Q9H4G0 881 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CYP3A43Q9HB55 503 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 OR12D3Q9UGF7 316 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 GNEQ9Y223 722 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 SLCO1B7G3V0H7 640 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 LRG1P02750 347 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 SERPINA6P08185 405 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 HGFP14210 728 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CCR10P46092 362 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 YAP1P46937 504 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 ST8SIA6P61647 398 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 RPL38P63173 70 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 DDR2Q16832 855 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ZNF57Q68EA5 555 aaPredicted RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 NEPROQ6NW34 567 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 GCNT7Q6ZNI0 430 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 GLT6D1Q7Z4J2 308 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CLEC4CQ8WTT0 213 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 OSCP1Q8WVF1 389 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ZFRQ96KR1 1074 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 HBEGFQ99075 208 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 MRPS26Q9BYN8 205 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 A0A1W2PQ67 120 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ASNA1O43681 348 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 EGFRP00533 1210 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CKMP06732 381 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ALOX15P16050 662 aaPredicted RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 CTPS1P17812 591 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 OR1E1P30953 314 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 GPC1P35052 558 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PSEN2P49810 448 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 IRF9Q00978 393 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ACSBG2Q5FVE4 666 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 PPM1LQ5SGD2 360 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 TRMT10BQ6PF06 316 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 KYAT3Q6YP21 454 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 MPP5Q8N3R9 675 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 MSL3Q8N5Y2 521 aaKnown RBP7.84□□□□□ -1.15
RIF1-206ENST00000453091 HPS1Q92902 700 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 NXNL1Q96CM4 212 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 CHRAC1Q9NRG0 131 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 ZDHHC18Q9NUE0 388 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 STXBP5LQ9Y2K9 1186 aa7.84□□□□□ -1.15
RIF1-206ENST00000453091 GPR182O15218 404 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 ITGAVP06756 1048 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 LTA4HP09960 611 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 CSH1P0DML2 217 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 CSH2P0DML3 217 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 FEN1P39748 380 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 RPL5P46777 297 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 CSNK2BP67870 215 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 XRRA1Q6P2D8 792 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 APLFQ8IW19 511 aaPredicted RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 SLC25A23Q9BV35 468 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 ALG2Q9H553 416 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 LIN28AQ9H9Z2 209 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 ENTPD7Q9NQZ7 604 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.83□□□□□ -1.164e-6■■□□□ 13.4
RIF1-206ENST00000453091 EHD3Q9NZN3 535 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 RSL24D1Q9UHA3 163 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 ZNF180Q9UJW8 692 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 TOR1BO14657 336 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 IDH2P48735 452 aaKnown RBP7.83□□□□□ -1.16
RIF1-206ENST00000453091 TBX4P57082 545 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 ARMC4Q5T2S8 1044 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 OVOS1Q6IE37 1185 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 ARHGAP36Q6ZRI8 547 aa7.83□□□□□ -1.16
RIF1-206ENST00000453091 RPS27LQ71UM5 84 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms