RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC41A1Q8IVJ1 513 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 NSMCE1Q8WV22 266 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 SPON2Q9BUD6 331 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 KIFC1Q9BW19 673 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 PRDM5Q9NQX1 630 aaPredicted RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 COPG2Q9UBF2 871 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 TLK1Q9UKI8 766 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 FCHO1O14526 889 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 BIRC5O15392 142 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 MGRN1O60291 552 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 CSPG5O95196 566 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 GJB5O95377 273 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 TGDSO95455 350 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 PROCP04070 461 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 FGF3P11487 239 aaPredicted RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 CPA3P15088 417 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 DNAJB2P25686 324 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 HTR7P34969 479 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 THOC5Q13769 683 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 TAF12Q16514 161 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 NADSYN1Q6IA69 706 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 UMODL1-AS1Q8N2C9 162 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 SCYL1Q96KG9 808 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 C7orf26Q96N11 449 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 TASP1Q9H6P5 420 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 NOD2Q9HC29 1040 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 ENTPD7Q9NQZ7 604 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 OLA1Q9NTK5 396 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 THAP1Q9NVV9 213 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 A0A0D9SEW6 157 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 TIMM44O43615 452 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PRKCGP05129 697 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 RALBP11234 206 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 GABRB3P28472 473 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 CA8P35219 290 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 MAP2K2P36507 400 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 TLE2Q04725 743 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 ZNF683Q8IZ20 524 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 SLC7A6OSQ96CW6 309 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 CFHR5Q9BXR6 569 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 HBS1LQ9Y450 684 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 AURKAO14965 403 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 HOXA2O43364 376 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 CACNG3O60359 315 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PIRTP0C851 137 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PSEN1P49768 467 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 HNRNPDQ14103 355 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 HSF5Q4G112 596 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 AFMIDQ63HM1 303 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 RANBP10Q6VN20 620 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 LONP2Q86WA8 852 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 ZC3HC1Q86WB0 502 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 RNF135Q8IUD6 432 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 LRRC43Q8N309 656 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 OXCT2Q9BYC2 517 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 CYP4F11Q9HBI6 524 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PNPOQ9NVS9 261 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 IL37Q9NZH6 218 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 TCAF1Q9Y4C2 921 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 TK2O00142 265 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 AP3B1O00203 1094 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PEX11BO96011 259 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 ADRA1AP35348 466 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 ATP5C1P36542 298 aaKnown RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 NDST2P52849 883 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 IHHQ14623 411 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 TRIM60Q495X7 471 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 ATG14Q6ZNE5 492 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 LDB1Q86U70 411 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 OR6P1Q8NGX9 317 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 AUTS2Q8WXX7 1259 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PPP1R36Q96LQ0 422 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 NDNQ99608 321 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 LBHD1Q9BQE6 289 aaPredicted RBP11.93□□□□□ -0.5
VTA1-203ENST00000452973 SHCBP1LQ9BZQ2 653 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 SLC25A51Q9H1U9 297 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 L3MBTL1Q9Y468 752 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
VTA1-203ENST00000452973 FAM92AA1XBS5 289 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 F5H5T6 163 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 TSPAN3O60637 253 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 SNNO75324 88 aaPredicted RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 ENO1P06733 434 aaKnown RBP11.92□□□□□ -0.5
VTA1-203ENST00000452973 TACR2P21452 398 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ARNTP27540 789 aa11.92□□□□□ -0.5
VTA1-203ENST00000452973 ARRB2P32121 409 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms