RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 DEFB115Q30KQ5 88 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 AKNAD1Q5T1N1 836 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ANKRD40Q6AI12 368 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ARMC8Q8IUR7 673 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ABRAQ8N0Z2 381 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 LSMEM1Q8N8F7 131 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 USP38Q8NB14 1042 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ZMIZ2Q8NF64 920 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 GRAPLQ8TC17 118 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 RFKQ969G6 155 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ZNF764Q96H86 408 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 REXO5Q96IC2 774 aaKnown RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PBKQ96KB5 322 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 UROC1Q96N76 676 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 EIF3CQ99613 913 aaKnown RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PHF7Q9BWX1 381 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ARHGAP39Q9C0H5 1083 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 LMAN2LQ9H0V9 348 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 TLR8Q9NR97 1041 aaKnown RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 HYPKQ9NX55 129 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ST3GAL5Q9UNP4 418 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PCDHA10Q9Y5I2 948 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ENTPD2Q9Y5L3 495 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 KAT6AQ92794 2004 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 AKAP11Q9UKA4 1901 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 THSD7BQ9C0I4 1608 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 CDHR2Q9BYE9 1310 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PSME4Q14997 1843 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 LRRC3CA6NJW4 275 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 M0QZQ0 153 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CHL1O00533 1208 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 PTP4A3O75365 173 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TMEM63AO94886 807 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 WDR47O94967 919 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ALADP13716 330 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 AKR1B1P15121 316 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CHMP24386 653 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 PSMC2P35998 433 aaKnown RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 EPS15P42566 896 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 PAFAH1B1P43034 410 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 GMPSP49915 693 aaPredicted RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CDK7P50613 346 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ARF3P61204 181 aaPredicted RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ARF1P84077 181 aaKnown RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TIAL1Q01085 375 aaKnown RBP eCLIP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CXCL9Q07325 125 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 MTAPQ13126 283 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 EIF2B5Q13144 721 aaKnown RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 BFSP2Q13515 415 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TBCEQ15813 527 aaPredicted RBP4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TBCCQ15814 346 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CFAP58Q5T655 872 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TSTD2Q5T7W7 516 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 SNX30Q5VWJ9 437 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 SLC9A4Q6AI14 798 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CCDC144NLQ6NUI1 221 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 SLC22A25Q6T423 547 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TMCO3Q6UWJ1 677 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TMTC3Q6ZXV5 915 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 LRRC8DQ7L1W4 858 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CPLX4Q7Z7G2 160 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 LRRC71Q8N4P6 559 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ANKRD44Q8N8A2 993 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 FSIP1Q8NA03 581 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 OSCP1Q8WVF1 389 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ATG4AQ8WYN0 398 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TIGD1Q96MW7 591 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 EYA3Q99504 573 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 TIMP4Q99727 224 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ALG8Q9BVK2 526 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 SLC25A18Q9H1K4 315 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 CPNE5Q9HCH3 593 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 NKIRAS2Q9NYR9 191 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 EHD3Q9NZN3 535 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 BAG5Q9UL15 447 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 NFU1Q9UMS0 254 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 PIAS3Q9Y6X2 628 aa4.7□□□□□ -1.66
LINC00393-202ENST00000452852 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 LOC105369274A0A096LPK9 316 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 LOC102723532A0A0G2JNH3 316 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 CTIFO43310 598 aaKnown RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 URI1O94763 535 aaPredicted RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 CELF2O95319 508 aaKnown RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 F9P00740 461 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 MYCLP12524 364 aaPredicted RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 ZFXP17010 805 aaPredicted RBP4.69□□□□□ -1.66
LINC00393-202ENST00000452852 RGS2P41220 211 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 MCM2P49736 904 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 LBX1P52954 281 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 TERF1P54274 439 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 TIRAPP58753 221 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 ACOX1Q15067 660 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 KRT24Q2M2I5 525 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 SPECC1Q5M775 1068 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 CBWD5Q5RIA9 395 aa4.69□□□□□ -1.66
LINC00393-202ENST00000452852 MFSD4BQ5TF39 518 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms