RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PROSCO94903 275 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 LCA5LO95447 670 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 GSRP00390 522 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 DESP17661 470 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 LEKR1Q6ZMV7 388 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 RGL4Q8IZJ4 473 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 ZNF564Q8TBZ8 553 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 CASKIN2Q8WXE0 1202 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 HEPHQ9BQS7 1158 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 NUSAP1Q9BXS6 441 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 PCDH18Q9HCL0 1135 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 SPTLC3Q9NUV7 552 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 DNAAF2Q9NVR5 837 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 CABIN1Q9Y6J0 2220 aa16.39■□□□□ 0.22
SCAMP4-205ENST00000452128 A0A1W2PR77 199 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 MEI4A8MW99 385 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 C1QTNF3-AMACRE9PGA6 284 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 J3KR12 359 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 TMCC1O94876 653 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PEX11BO96011 259 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PRNPP04156 253 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 CFIP05156 583 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 GNSP15586 552 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PAPOLAP51003 745 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 GEMIN4P57678 1058 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PPP2CBP62714 309 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PPP2CAP67775 309 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 ATP13A4Q4VNC1 1196 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PIP4P1Q86T03 277 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 OR14C36Q8NHC7 312 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 GANCQ8TET4 914 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 CSPG4P5Q96PW8 444 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 TMEM9BQ9NQ34 198 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 HECAQ9UBI9 543 aaPredicted RBP16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 LHX3Q9UBR4 397 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 IL36AQ9UHA7 158 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 HPCAL4Q9UM19 191 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 PCNX2A6NKB5 2137 aa16.39■□□□□ 0.21
SCAMP4-205ENST00000452128 LRRC72A6NJI9 287 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 SPINT1O43278 529 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 BUB1O43683 1085 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 AKR1B10O60218 316 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 BNIP3LO60238 219 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 FSBPO95073 299 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 POP4O95707 220 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 WNT1P04628 370 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 AMPD1P23109 780 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 GKP32189 559 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 TAS2R40P59535 323 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 GRIK2Q13002 908 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 POM121L1PQ3SYA9 428 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 DBX2Q6ZNG2 339 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 ERN2Q76MJ5 926 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 TRIM69Q86WT6 500 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 NETO2Q8NC67 525 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 OR2AP1Q8NGE2 309 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 OR2I1PQ8NGU4 316 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 SLC35G2Q8TBE7 412 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 LRIG1Q96JA1 1093 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 TM6SF2Q9BZW4 377 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 ZDHHC5Q9C0B5 715 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 INTUQ9ULD6 942 aa16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 TPX2Q9ULW0 747 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-205ENST00000452128 CD48P09326 243 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 TPM1P09493 284 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 CD59P13987 128 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 ITGB7P26010 798 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 MAN1A1P33908 653 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 CSNK1EP49674 416 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 RACK1P63244 317 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 ATXN7L2Q5T6C5 722 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 NEK5Q6P3R8 708 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 ARHGAP36Q6ZRI8 547 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 LZTR1Q8N653 840 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 CTNNBL1Q8WYA6 563 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 FAF2Q96CS3 445 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 MIR1-1HGQ9H1L0 117 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 ZWILCHQ9H900 591 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 PREBQ9HCU5 417 aa16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 CTTNBP2NLQ9P2B4 639 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms