RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 IQCHQ86VS3 1027 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 SPATS2Q86XZ4 545 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 GATAD2AQ86YP4 633 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 MCOLN2Q8IZK6 566 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 PYROXD2Q8N2H3 581 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 TMEM145Q8NBT3 493 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 SAP25Q8TEE9 199 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ISG20Q96AZ6 181 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 MAGEH1Q9H213 219 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 NOL6Q9H6R4 1146 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ERVMER34-1Q9H9K5 563 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 DNAI1Q9UI46 699 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ZMIZ1Q9ULJ6 1067 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 TRPM6Q9BX84 2022 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ARID1BQ8NFD5 2236 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 A0A1B0GTH6 734 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 A0A1W2PQC6 194 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 LRRC53A6NM62 1247 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 YKT6O15498 198 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 TNFSF14O43557 240 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 RAMP2O60895 175 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 RNGTTO60942 597 aaKnown RBP12.71□□□□□ -0.37
CPSF4-208ENST00000452047 CAPNS1P04632 268 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 ITGB7P26010 798 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 EPHA8P29322 1005 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-208ENST00000452047 RXRGP48443 463 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 ZNF165P49910 485 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 OVGP1Q12889 678 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 IQCB1Q15051 598 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 ZNF284Q2VY69 593 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 INAVAQ3KP66 663 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 SLC45A4Q5BKX6 768 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 CARD16Q5EG05 197 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 EFHC2Q5JST6 749 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 KANSL1Q7Z3B3 1105 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 RTL3Q8N8U3 475 aaKnown RBP12.71□□□□□ -0.37
CPSF4-208ENST00000452047 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.37
CPSF4-208ENST00000452047 CA5BQ9Y2D0 317 aa12.71□□□□□ -0.37
CPSF4-208ENST00000452047 ADRB3P13945 408 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 PRLRP16471 622 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 EPHB2P29323 1055 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 NEK3P51956 506 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 AIF1P55008 147 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 GEMIN4P57678 1058 aaKnown RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 STAT4Q14765 748 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 PARS2Q7L3T8 475 aaKnown RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 HORMAD1Q86X24 394 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 OXR1Q8N573 874 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 AIPL1Q9NZN9 384 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 HECAQ9UBI9 543 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-208ENST00000452047 FTSJ1Q9UET6 329 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 FZD10Q9ULW2 581 aa12.7□□□□□ -0.38
CPSF4-208ENST00000452047 LOC400499M0QZD8 3231 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 ANKRD62A6NC57 917 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 WASH4PA8MWX3 477 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 SLC31A1O15431 190 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-208ENST00000452047 KDELR3O43731 214 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 AP1G1O43747 822 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 MAGEC1O60732 1142 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 GSRP00390 522 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 ITGAVP06756 1048 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 TNFAIP3P21580 790 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
CPSF4-208ENST00000452047 GKP32189 559 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 PRKCIP41743 596 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 DNA2P51530 1060 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 BNIP3Q12983 259 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 POLD3Q15054 466 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-208ENST00000452047 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 SEL1L3Q68CR1 1132 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 PLEKHA7Q6IQ23 1121 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 PPP1R2P3Q6NXS1 205 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 SCYL2Q6P3W7 929 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 TMPRSS7Q7RTY8 843 aa12.69□□□□□ -0.38
CPSF4-208ENST00000452047 ZNF571Q7Z3V5 609 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-208ENST00000452047 TMC6Q7Z403 805 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms