RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SMARCAL1Q9NZC9 954 aa24.45■■□□□ 1.5
CPSF4-207ENST00000451876 LAMTOR5O43504 91 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 CCNB1P14635 433 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 GABRG2P18507 467 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 NDUFV2P19404 249 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 PXNP49023 591 aaPredicted RBP24.44■■□□□ 1.5
CPSF4-207ENST00000451876 EIF3EP60228 445 aaKnown RBP24.44■■□□□ 1.5
CPSF4-207ENST00000451876 ZNF33AQ06730 810 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 ZBTB17Q13105 803 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 HNRNPDQ14103 355 aaKnown RBP24.44■■□□□ 1.5
CPSF4-207ENST00000451876 MARC1Q5VT66 337 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 CHST14Q8NCH0 376 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 MDGA1Q8NFP4 955 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 OR2AP1Q8NGE2 309 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 OR2T3Q8NH03 318 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 FATE1Q969F0 183 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 VOPP1Q96AW1 172 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 CEP41Q9BYV8 373 aa24.44■■□□□ 1.5
CPSF4-207ENST00000451876 RNF103O00237 685 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 GJB3O75712 270 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 RBP3P10745 1247 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 MMP13P45452 471 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 CCNHP51946 323 aaPredicted RBP24.43■■□□□ 1.5
CPSF4-207ENST00000451876 XRCC4Q13426 336 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 ELAVL3Q14576 367 aaKnown RBP24.43■■□□□ 1.5
CPSF4-207ENST00000451876 ZNF235Q14590 738 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 CARD16Q5EG05 197 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 TEX26Q8N6G2 289 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 TTC13Q8NBP0 860 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 NSMCE1Q8WV22 266 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 HMGB4Q8WW32 186 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 MRGPRX1Q96LB2 322 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 PSKH2Q96QS6 385 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 FAM129BQ96TA1 746 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 BRD8Q9H0E9 1235 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 SEPT3Q9UH03 358 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 H7C0C1 242 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 MCF2LO15068 1137 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 GSRP00390 522 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 CTSLP07711 333 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 TDGF1P13385 188 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 TCP1P17987 556 aaKnown RBP24.43■■□□□ 1.5
CPSF4-207ENST00000451876 GKP32189 559 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 ATP5OP48047 213 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 MAXP61244 160 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 LONRF2Q1L5Z9 754 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 SLC45A4Q5BKX6 768 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 RSPH9Q9H1X1 276 aaPredicted RBP24.43■■□□□ 1.5
CPSF4-207ENST00000451876 SEPT10Q9P0V9 454 aa24.43■■□□□ 1.5
CPSF4-207ENST00000451876 APBB3O95704 486 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 RENBPP51606 427 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 SNRPD1P62314 119 aaKnown RBP24.42■■□□□ 1.5
CPSF4-207ENST00000451876 IFI35P80217 286 aaPredicted RBP24.42■■□□□ 1.5
CPSF4-207ENST00000451876 DMWDQ09019 674 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 ZSCAN30Q86W11 494 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 RASSF3Q86WH2 238 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 TMPRSS6Q8IU80 811 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 CAMKK1Q8N5S9 505 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 SLC35B2Q8TB61 432 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 C1orf54Q8WWF1 131 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 GDAP1L1Q96MZ0 367 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 IL12RB2Q99665 862 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 NT5MQ9NPB1 228 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 DNPEPQ9ULA0 475 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 TTC7AQ9ULT0 858 aaPredicted RBP24.42■■□□□ 1.5
CPSF4-207ENST00000451876 SAR1BQ9Y6B6 198 aa24.42■■□□□ 1.5
CPSF4-207ENST00000451876 TTC24A2A3L6 582 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-207ENST00000451876 HACD1B0YJ81 288 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 CES2O00748 559 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 JCHAINP01591 159 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 HLA-DQB2P05538 268 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 PRLRP16471 622 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 RBL1P28749 1068 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 CASQ1P31415 396 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 RECQLP46063 649 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-207ENST00000451876 NRLP54845 237 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 USP34Q70CQ2 3546 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 MMAAQ8IVH4 418 aaKnown RBP24.41■■□□□ 1.5
CPSF4-207ENST00000451876 RYBPQ8N488 228 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-207ENST00000451876 CNTD1Q8N815 330 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 GRIN3AQ8TCU5 1115 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 OR8D1Q8WZ84 308 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 CCDC114Q96M63 670 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 MGME1Q9BQP7 344 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 RBM22Q9NW64 420 aaKnown RBP eCLIP24.41■■□□□ 1.54e-6■■■□□ 14.6
CPSF4-207ENST00000451876 EVLQ9UI08 416 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-207ENST00000451876 SARDHQ9UL12 918 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 WASF2Q9Y6W5 498 aa24.41■■□□□ 1.5
CPSF4-207ENST00000451876 INSIG1O15503 277 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 IGSF6O95976 241 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 METAP1P53582 386 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 WASHC5Q12768 1159 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 HEATR6Q6AI08 1181 aaKnown RBP24.4■■□□□ 1.5
CPSF4-207ENST00000451876 PLPP6Q8IY26 295 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 HTR3CQ8WXA8 447 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 NSMCE3Q96MG7 304 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 TPSD1Q9BZJ3 242 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 ZDHHC6Q9H6R6 413 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 FBRSQ9HAH7 460 aa24.4■■□□□ 1.5
CPSF4-207ENST00000451876 CD93Q9NPY3 652 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms