RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 TRABD2AQ86V40 505 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 SYT12Q8IV01 421 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 ADHFE1Q8IWW8 467 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 WDR48Q8TAF3 677 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
SMARCA4-205ENST00000450717 ANXA5P08758 320 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 GOT1P17174 413 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 RAB14P61106 215 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ZSCAN18Q8TBC5 510 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 TBC1D10AQ9BXI6 508 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 KPNA5O15131 536 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 HPGDP15428 266 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 CRADDP78560 199 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MRPS22P82650 360 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 LIPMQ5VYY2 423 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 METTL3Q86U44 580 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ZNF276Q8N554 614 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ALG3Q92685 438 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 DUSP16Q9BY84 665 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MRPS26Q9BYN8 205 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 CNGB3Q9NQW8 809 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 SNX6Q9UNH7 406 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 GIT1Q9Y2X7 761 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 HSMCR30P0CW71 290 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 CES1P23141 567 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 GUCA1AP43080 201 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 RFX3P48380 749 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 PKNOX1P55347 436 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ACSM2AQ08AH3 577 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ACSM2BQ68CK6 577 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 TXNDC11Q6PKC3 985 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MIEF2Q96C03 454 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 QRFPRQ96P65 431 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MLPHQ9BV36 600 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ZSCAN32Q9NX65 697 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 B4GALT4O60513 344 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 TALDO1P37837 337 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 RAP1GAP2Q684P5 730 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 TRPC4APQ8TEL6 797 aa13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 POP5Q969H6 163 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-205ENST00000450717 TRIM38O00635 465 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 HDAC3O15379 428 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 TTKP33981 857 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 SGCGQ13326 291 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 HGSNATQ68CP4 663 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 AGAP11Q8TF27 550 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 TPD52L3Q96J77 140 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 KREMEN1Q96MU8 473 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 PURBQ96QR8 312 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 PCDHB18PQ96TA0 734 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 ACADMP11310 421 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 WEE1P30291 646 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 IFNGR2P38484 337 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 CREMQ03060 361 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 TSNQ15631 228 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 ATL1Q8WXF7 558 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 SPAG4Q9NPE6 437 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 RCOR3Q9P2K3 495 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 FAM50BQ9Y247 325 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.274e-6■■■■■ 156
SMARCA4-205ENST00000450717 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 BANF1O75531 89 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 INHBEP58166 350 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 CLVS1Q8IUQ0 354 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 IQCKQ8N0W5 287 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 DPP10Q8N608 796 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 PCDH20Q8N6Y1 951 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 PPP3R2Q96LZ3 170 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 CCDC3Q9BQI4 270 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 NLNQ9BYT8 704 aa13.35□□□□□ -0.27
SMARCA4-205ENST00000450717 IRF6O14896 467 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms