RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 C3orf14Q9HBI5 128 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 IL1RAPL1Q9NZN1 696 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 HEBP2Q9Y5Z4 205 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3DA0A087WVF3 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3IA0A087WXS9 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3EA0A087X179 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3KA0A087X1G2 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3FA6NER0 549 aaPredicted RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3LB9A6J9 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 FGF1P05230 155 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3HP0C7X1 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TUSC3Q13454 348 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 AGKQ53H12 422 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3GQ6DHY5 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3CQ6IPX1 549 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TBC1D3Q8IZP1 549 aaPredicted RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 EMC1Q8N766 993 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TPD52L3Q96J77 140 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TRIM8Q9BZR9 551 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 ADAM28Q9UKQ2 775 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 KCNE2Q9Y6J6 123 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 E5RJQ4 531 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 HOXC12P31275 282 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 S100A3P33764 101 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 UBE3AQ05086 875 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 KYQ8NBH2 561 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 RNASE11Q8TAA1 199 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 ZNF670Q9BS34 389 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MID1IP1Q9NPA3 183 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 V9GYQ6 96 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TFE3P19532 575 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 CD52P31358 61 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ZNF143P52747 638 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 USP4Q13107 963 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 DGKZQ13574 1117 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 PRAMEF19Q5SWL8 479 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 STXBP5Q5T5C0 1151 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 GATAD2AQ86YP4 633 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 FAM126BQ8IXS8 530 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 KIAA2013Q8IYS2 634 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 PXDNQ92626 1479 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 RPIAP49247 311 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 CLCN5P51795 746 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 PWP1Q13610 501 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 TERF2Q15554 542 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 CCDC81Q6ZN84 652 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 METTL21AQ8WXB1 218 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 BTN2A3PQ96KV6 586 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 SCUBE1Q8IWY4 988 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 OR10H1Q9Y4A9 318 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ABCC6O95255 1503 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 SERPINE1P05121 402 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ATP6V1B2P21281 511 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 MIPP30301 263 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 CD86P42081 329 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 KCNA10Q16322 511 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 GPR20Q99678 358 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ITGA2P17301 1181 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 WARSP23381 471 aaKnown RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 VAC14Q08AM6 782 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ATP13A5Q4VNC0 1218 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 ADAM32Q8TC27 787 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 MYLK2Q9H1R3 596 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 MMADHCQ9H3L0 296 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 PALMDQ9NP74 551 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 NECTIN3Q9NQS3 549 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 TRIP12Q14669 1992 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 DYTNA2CJ06 578 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 SEPT4O43236 478 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 CLDN11O75508 207 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 BAIAP3O94812 1187 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 LDOC1O95751 146 aaPredicted RBP11.84□□□□□ -0.51
FN1-212ENST00000446046 DDX6P26196 483 aaKnown RBP eCLIP11.84□□□□□ -0.511e-11■■■■□ 22.1
FN1-212ENST00000446046 GABRR2P28476 465 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 DDR1Q08345 913 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 LGALS3BPQ08380 585 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 TTC23Q5W5X9 447 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 FAM20CQ8IXL6 584 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 KCNS3Q9BQ31 491 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
FN1-212ENST00000446046 E7ENQ6 273 aa11.83□□□□□ -0.52
FN1-212ENST00000446046 PEX1O43933 1283 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms