RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PRRG1O14668 218 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 RAG1P15918 1043 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 PAMP19021 973 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 SLC6A4P31645 630 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 EPHB3P54753 998 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 ACTN3Q08043 901 aaPredicted RBP19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 CCDC15Q0P6D6 951 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 PLD1Q13393 1074 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 LBRQ14739 615 aaKnown RBP19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 ATG16L1Q676U5 607 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 FAM117BQ6P1L5 589 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 TADA1Q96BN2 335 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 TSSK1BQ9BXA7 367 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 MRPL17Q9NRX2 175 aaKnown RBP19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 SIRPGQ9P1W8 387 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 SSX2IPQ9Y2D8 614 aa19.14■□□□□ 0.65
SEMA3D-202ENST00000444867 OBSL1O75147 1896 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 TRIM43BA6NCK2 446 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 CLDN11O75508 207 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 STC2O76061 302 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 TGDSO95455 350 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 LATS1O95835 1130 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 ITKQ08881 620 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 SF3A3Q12874 501 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 PDE1CQ14123 709 aaPredicted RBP19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 UGP2Q16851 508 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 CHST9Q7L1S5 443 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 CIR1Q86X95 450 aaPredicted RBP19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 CNTN4Q8IWV2 1026 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 ARMC2Q8NEN0 867 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 TRIM43Q96BQ3 446 aaPredicted RBP19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 MYEOVQ96EZ4 313 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 MCMBPQ9BTE3 642 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 KLF16Q9BXK1 252 aaPredicted RBP19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 RXFP1Q9HBX9 757 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 IL1RAPL1Q9NZN1 696 aa19.13■□□□□ 0.65
SEMA3D-202ENST00000444867 MPOP05164 745 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 BGNP21810 368 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 ITGB8P26012 769 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 TYK2P29597 1187 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 ALDH3A1P30838 453 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 LIG3P49916 1009 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 TWF1Q12792 350 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 POU6F1Q14863 301 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 NECAB2Q7Z6G3 386 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 ITIH5Q86UX2 942 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 DENND1CQ8IV53 801 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 BBS5Q8N3I7 341 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 DCLK2Q8N568 766 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 PTPRN2Q92932 1015 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 KLHL5Q96PQ7 755 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 YME1L1Q96TA2 773 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 AGAP2Q99490 1192 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 POLR1EQ9GZS1 481 aaKnown RBP19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 PDFQ9HBH1 243 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 IARS2Q9NSE4 1012 aaKnown RBP19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 ABCF3Q9NUQ8 709 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 PCDHB12Q9Y5F1 795 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 INSL5Q9Y5Q6 135 aa19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 ZFP37Q9Y6Q3 630 aaPredicted RBP19.12■□□□□ 0.65
SEMA3D-202ENST00000444867 HEATR9A2RTY3 570 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SIN3BO75182 1162 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 BPGMP07738 259 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 MMP2P08253 660 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 CORO1AP31146 461 aaKnown RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ACVRL1P37023 503 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 CD86P42081 329 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 POLD2P49005 469 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 GNA12Q03113 381 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SLC14A2Q15849 920 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 KIAA0930Q6ICG6 404 aaPredicted RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 TMCO2Q7Z6W1 182 aaPredicted RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 DNAJB7Q7Z6W7 309 aaPredicted RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 NUDCD3Q8IVD9 361 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 HERC6Q8IVU3 1022 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ARRDC2Q8TBH0 407 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 C10orf82Q8WW14 230 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ALG13Q9NP73 1137 aaKnown RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SNX15Q9NRS6 342 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 TREX1Q9NSU2 369 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SLC12A4Q9UP95 1085 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 LILRB3O75022 631 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 DCTN3O75935 186 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 PAPSS2O95340 614 aaPredicted RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SCTRP47872 440 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 SERPINH1P50454 418 aaKnown RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 DSC2Q02487 901 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ZNF235Q14590 738 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 GALNTL6Q49A17 601 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 PABPC1LQ4VXU2 614 aaKnown RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ADGRF1Q5T601 910 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 ALG1LQ6GMV1 187 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 FSTL4Q6MZW2 842 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 RFWD3Q6PCD5 774 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 C10orf67Q8IYJ2 551 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 CFAP52Q8N1V2 620 aa19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 GABPB2Q8TAK5 448 aaPredicted RBP19.11■□□□□ 0.65
SEMA3D-202ENST00000444867 E2F7Q96AV8 911 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms