RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 HSPA12BQ96MM6 686 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 FERMT1Q9BQL6 677 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 HECAQ9UBI9 543 aaPredicted RBP12.47□□□□□ -0.41
LTBR-204ENST00000444814 SEPT3Q9UH03 358 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 IPO11Q9UI26 975 aaKnown RBP12.47□□□□□ -0.41
LTBR-204ENST00000444814 PPM1HQ9ULR3 514 aa12.47□□□□□ -0.41
LTBR-204ENST00000444814 A0A1W2PP55 124 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 TMCC1O94876 653 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 MT-CO1P00395 513 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 BCKDHBP21953 392 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 COMTP21964 271 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 XPAP23025 273 aaPredicted RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 AMPD1P23109 780 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 GLDCP23378 1020 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 KDELR1P24390 212 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 SUOXP51687 545 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 CCNHP51946 323 aaPredicted RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 DPYSL3Q14195 570 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ZNF235Q14590 738 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 DUOXA1Q1HG43 343 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 OR14C36Q8NHC7 312 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 KIAA1524Q8TCG1 905 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 PIGKQ92643 395 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 RAB7BQ96AH8 199 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ZNF419Q96HQ0 510 aaPredicted RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 CELF6Q96J87 481 aaKnown RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 FAM129BQ96TA1 746 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 MAGEB5Q9BZ81 275 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 SLC39A8Q9C0K1 460 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 SLC6A17Q9H1V8 727 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ARRDC1-AS1Q9H2J1 176 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 TNKS2Q9H2K2 1166 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ZDHHC6Q9H6R6 413 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 MBD1Q9UIS9 605 aaPredicted RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 FCF1Q9Y324 198 aaKnown RBP12.46□□□□□ -0.42
LTBR-204ENST00000444814 ALG6Q9Y672 507 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.42
LTBR-204ENST00000444814 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 K7ERQ8 282 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 RIOK3O14730 519 aaKnown RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 APOL1O14791 398 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 PJA2O43164 708 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 BUB1BO60566 1050 aaPredicted RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 ZRANB2O95218 330 aaKnown RBP eCLIP12.45□□□□□ -0.42
LTBR-204ENST00000444814 SYPP08247 313 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 CCDC175P0C221 793 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 TNNT1P13805 278 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 NUMBP49757 651 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 NEK3P51956 506 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 ATXN3P54252 364 aaPredicted RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 GSE1Q14687 1217 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 TEAD4Q15561 434 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 RALGPS1Q5JS13 557 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 ARTNQ5T4W7 220 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 NEK5Q6P3R8 708 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 FBXL19Q6PCT2 694 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 RAD9BQ6WBX8 426 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 DPY19L3Q6ZPD9 716 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 PRPF39Q86UA1 669 aaKnown RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 RCOR2Q8IZ40 523 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 RNF10Q8N5U6 811 aaKnown RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 UBL4BQ8N7F7 174 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 HCAR2Q8TDS4 363 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 SNX19Q92543 992 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 TSC1Q92574 1164 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 TUBGCP5Q96RT8 1024 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 TM6SF2Q9BZW4 377 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 MTG2Q9H4K7 406 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 NOL6Q9H6R4 1146 aaKnown RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 PREBQ9HCU5 417 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 SEMA4GQ9NTN9 838 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 EVLQ9UI08 416 aaPredicted RBP12.45□□□□□ -0.42
LTBR-204ENST00000444814 CACNA1HO95180 2353 aa12.45□□□□□ -0.42
LTBR-204ENST00000444814 MUC22E2RYF6 1773 aaPredicted RBP12.44□□□□□ -0.42
LTBR-204ENST00000444814 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.44□□□□□ -0.42
LTBR-204ENST00000444814 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
LTBR-204ENST00000444814 KRIT1O00522 736 aa12.44□□□□□ -0.42
LTBR-204ENST00000444814 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
LTBR-204ENST00000444814 SMAD6O43541 496 aaKnown RBP12.44□□□□□ -0.42
LTBR-204ENST00000444814 KRT10P13645 584 aa12.44□□□□□ -0.42
LTBR-204ENST00000444814 VAV1P15498 845 aa12.44□□□□□ -0.42
LTBR-204ENST00000444814 TCF4P15884 667 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms