RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 KLC2Q9H0B6 622 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 MTG2Q9H4K7 406 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 ZDHHC6Q9H6R6 413 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 hCG_1818297A0A087WSY0 165 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 KPNA3O00505 521 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 KRIT1O00522 736 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF189O75820 626 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 KRT10P13645 584 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 VAV1P15498 845 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 CCNCP24863 283 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 SLC8A1P32418 973 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 MARCKSL1P49006 195 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 CCNHP51946 323 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 RPS14P62263 151 aaKnown RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 DMWDQ09019 674 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 AP1B1Q10567 949 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 USP30Q70CQ3 517 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 LPCAT2Q7L5N7 544 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 PQLC3Q8N755 202 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 PLD5Q8N7P1 536 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 TMIEQ8NEW7 156 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 OR2A12Q8NGT7 310 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 GRIN3AQ8TCU5 1115 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 HAUS1Q96CS2 278 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 HDAC11Q96DB2 347 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 HES6Q96HZ4 224 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 OSBPL8Q9BZF1 889 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 BTBD1Q9H0C5 482 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 PABPC3Q9H361 631 aaKnown RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 ITM2CQ9NQX7 267 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 FBXL12Q9NXK8 326 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-208ENST00000444533 CYP8B1Q9UNU6 501 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 MFHAS1Q9Y4C4 1052 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 R4GN57 208 aa14.33□□□□□ -0.12
SSBP3-208ENST00000444533 MATN3O15232 486 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 MTSS1O43312 755 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 MAFKO60675 156 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 RNASEH2AO75792 299 aaKnown RBP14.32□□□□□ -0.12
SSBP3-208ENST00000444533 CD6P30203 668 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 PTPN7P35236 360 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 P2RY2P41231 377 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 MMP13P45452 471 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 PEX5P50542 639 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 TPMTP51580 245 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 GBE1Q04446 702 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 ITKQ08881 620 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
SSBP3-208ENST00000444533 MYLK3Q32MK0 819 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 DPY19L3Q6ZPD9 716 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 CCDC13Q8IYE1 715 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 HDDC3Q8N4P3 179 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 TTC13Q8NBP0 860 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 NETO2Q8NC67 525 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 TFB1MQ8WVM0 346 aaKnown RBP14.32□□□□□ -0.12
SSBP3-208ENST00000444533 RLN3Q8WXF3 142 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-208ENST00000444533 TSGA13Q96PP4 275 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 FAM129BQ96TA1 746 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 HEMGNQ9BXL5 484 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 SLC6A17Q9H1V8 727 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 PDFQ9HBH1 243 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 SGK2Q9HBY8 427 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 USP36Q9P275 1121 aaKnown RBP14.32□□□□□ -0.12
SSBP3-208ENST00000444533 AMACRQ9UHK6 382 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 FZD4Q9ULV1 537 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 JRKLQ9Y4A0 524 aa14.32□□□□□ -0.12
SSBP3-208ENST00000444533 LRRC72A6NJI9 287 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 APOC4-APOC2K7ER74 178 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 KCNK3O14649 394 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 MID1O15344 667 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 LILRB5O75023 590 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 MAP3K6O95382 1288 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 APOC2P02655 101 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 PYGMP11217 842 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 CCNB1P14635 433 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 XPAP23025 273 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-208ENST00000444533 CES1P23141 567 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 NFKBIAP25963 317 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 NBL1P41271 181 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 RPL6Q02878 288 aaKnown RBP14.31□□□□□ -0.12
SSBP3-208ENST00000444533 NSUN2Q08J23 767 aaKnown RBP eCLIP14.31□□□□□ -0.12
SSBP3-208ENST00000444533 LLGL1Q15334 1064 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 CYTH1Q15438 398 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 TAZQ16635 292 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ZNF569Q5MCW4 686 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 SYCP2LQ5T4T6 812 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 MEI1Q5TIA1 1274 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ARHGAP36Q6ZRI8 547 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 FAM124AQ86V42 546 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 ALG3Q92685 438 aa14.31□□□□□ -0.12
SSBP3-208ENST00000444533 FOXJ1Q92949 421 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms