RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CCDC14Q49A88 953 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 C2CD6Q53TS8 623 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 HES3Q5TGS1 186 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 PDZD3Q86UT5 571 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 NLRP14Q86W24 1093 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 GRIN3AQ8TCU5 1115 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 RXFP2Q8WXD0 754 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 CASKIN2Q8WXE0 1202 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 LENG8Q96PV6 779 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 DUSP23Q9BVJ7 150 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 OSBPL1AQ9BXW6 950 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 SLC17A9Q9BYT1 436 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 VPS16Q9H269 839 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 TNKS2Q9H2K2 1166 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 TMPRSS4Q9NRS4 437 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 ZFR2Q9UPR6 939 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 FADS3Q9Y5Q0 445 aa16.63■□□□□ 0.25
CTDSP1-204ENST00000443891 KNTC1P50748 2209 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 GSRP00390 522 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 CALB1P05937 261 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 KRT3P12035 628 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 UNGP13051 313 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 GLDCP23378 1020 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 NSFP46459 744 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 RABIFP47224 123 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 CCNHP51946 323 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 AIF1P55008 147 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 HNRNPKP61978 463 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■□□□□ 8.8
CTDSP1-204ENST00000443891 SNRPD1P62314 119 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 COL28A1Q2UY09 1125 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 KYAT3Q6YP21 454 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 SLC25A45Q8N413 288 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 EMC1Q8N766 993 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 DENND6BQ8NEG7 585 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 TBC1D31Q96DN5 1066 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 GPR27Q9NS67 375 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 DONSONQ9NYP3 566 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 NLGN3Q9NZ94 848 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 ZFYVE26Q68DK2 2539 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 APC2O95996 2303 aa16.62■□□□□ 0.25
CTDSP1-204ENST00000443891 TOR1BO14657 336 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 SIGLEC6O43699 453 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 RAMP2O60895 175 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 PIAS2O75928 621 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 POP4O95707 220 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CD160O95971 181 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 GP1BAP07359 652 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CCDC172P0C7W6 258 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 PRLRP16471 622 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CHRNB2P17787 502 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 DUSP3P51452 185 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 DNA2P51530 1060 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 RAD51Q06609 339 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 TARDBPQ13148 414 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 SGCGQ13326 291 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 SYCP1Q15431 976 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 RWDD4Q6NW29 188 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 PPP1R2P3Q6NXS1 205 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 C19orf48Q6RUI8 117 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 GCNT7Q6ZNI0 430 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 FAM181AQ8N9Y4 354 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 C3orf20Q8ND61 904 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 OR13H1Q8NG92 308 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 OR2AP1Q8NGE2 309 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 SLC20A1Q8WUM9 679 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 C11orf70Q9BRQ4 267 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 C1QTNF2Q9BXJ5 285 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CALN1Q9BXU9 219 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 FAM207AQ9NSI2 230 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 NCKIPSDQ9NZQ3 722 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 ADAM22Q9P0K1 906 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CLCA2Q9UQC9 943 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 SIK3Q9Y2K2 1263 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 CSNK1G3Q9Y6M4 447 aa16.61■□□□□ 0.25
CTDSP1-204ENST00000443891 TP53BP1Q12888 1972 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 GOLGA4Q13439 2230 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 LRRC10BA6NIK2 292 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 SIGLEC16A6NMB1 481 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 SCAMP1O15126 338 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 LRIG2O94898 1065 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 CKMT1AP12532 417 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 DESP17661 470 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 YBEYP58557 167 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 DAB2P98082 770 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 PTP4A2Q12974 167 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 CDO1Q16878 200 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 INO80DQ53TQ3 878 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 ZNF805Q5CZA5 627 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 Q6ZSR6 202 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 MARCH9Q86YJ5 346 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 DCBLD1Q8N8Z6 715 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 NEK11Q8NG66 645 aa16.6■□□□□ 0.25
CTDSP1-204ENST00000443891 BMFQ96LC9 184 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms