RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 TM6SF2Q9BZW4 377 aa22.54■■□□□ 1.2
HDLBP-220ENST00000442730 KLC2Q9H0B6 622 aa22.54■■□□□ 1.2
HDLBP-220ENST00000442730 THAP2Q9H0W7 228 aa22.54■■□□□ 1.2
HDLBP-220ENST00000442730 DHX35Q9H5Z1 703 aaKnown RBP22.54■■□□□ 1.2
HDLBP-220ENST00000442730 PREBQ9HCU5 417 aa22.54■■□□□ 1.2
HDLBP-220ENST00000442730 ARHGAP20Q9P2F6 1191 aa22.54■■□□□ 1.2
HDLBP-220ENST00000442730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.54■■□□□ 1.25e-8■□□□□ 10.3
HDLBP-220ENST00000442730 ZSCAN5CA6NGD5 496 aaPredicted RBP22.53■■□□□ 1.2
HDLBP-220ENST00000442730 RASA4BC9J798 803 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 WNT9AO14904 365 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 VILLO15195 856 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 RASA4O43374 803 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 PRPSAP2O60256 369 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 RNF8O76064 485 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 HNRNPH3P31942 346 aaKnown RBP22.53■■□□□ 1.2
HDLBP-220ENST00000442730 YBEYP58557 167 aaPredicted RBP22.53■■□□□ 1.2
HDLBP-220ENST00000442730 ERMARDQ5T6L9 678 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 ADAT2Q7Z6V5 191 aaKnown RBP22.53■■□□□ 1.2
HDLBP-220ENST00000442730 NAXDQ8IW45 347 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 PLPP6Q8IY26 295 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 PPP1R16AQ96I34 528 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 SERAC1Q96JX3 654 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 KCTD15Q96SI1 283 aaPredicted RBP22.53■■□□□ 1.2
HDLBP-220ENST00000442730 HEPHQ9BQS7 1158 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 DYRK4Q9NR20 520 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 NENFQ9UMX5 172 aa22.53■■□□□ 1.2
HDLBP-220ENST00000442730 EEF2KO00418 725 aaKnown RBP22.52■■□□□ 1.2
HDLBP-220ENST00000442730 CBFA2T2O43439 604 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 BUB1O43683 1085 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 GSRP00390 522 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 WNT1P04628 370 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 ITGB7P26010 798 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 SERINC3Q13530 473 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 SPECC1LQ69YQ0 1117 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 NAPEPLDQ6IQ20 393 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 RFX8Q6ZV50 586 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 ERN2Q76MJ5 926 aaKnown RBP22.52■■□□□ 1.2
HDLBP-220ENST00000442730 ZNF354CQ86Y25 554 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 PSTKQ8IV42 348 aaKnown RBP22.52■■□□□ 1.2
HDLBP-220ENST00000442730 OR6K2Q8NGY2 324 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 VOPP1Q96AW1 172 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 CAMK1GQ96NX5 476 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 ZDHHC6Q9H6R6 413 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 LRRC19Q9H756 370 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 AASDHPPTQ9NRN7 309 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 TM7SF3Q9NS93 570 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 HECAQ9UBI9 543 aaPredicted RBP22.52■■□□□ 1.2
HDLBP-220ENST00000442730 ACACBO00763 2458 aa22.52■■□□□ 1.2
HDLBP-220ENST00000442730 A0A1W2PR77 199 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 SH3BP5O60239 455 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 TMCC1O94876 653 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 CYP1A2P05177 515 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 MAT2AP31153 395 aaKnown RBP22.51■■□□□ 1.19
HDLBP-220ENST00000442730 PCK1P35558 622 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 C21orf59P57076 290 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 CCDC15Q0P6D6 951 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 ZNF423Q2M1K9 1284 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 OR2AP1Q8NGE2 309 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 DNAJC7Q99615 494 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 NCAPGQ9BPX3 1015 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 KNL1Q8NG31 2342 aa22.51■■□□□ 1.19
HDLBP-220ENST00000442730 SPAARA0A1B0GVQ0 90 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 RNGTTO60942 597 aaKnown RBP22.5■■□□□ 1.19
HDLBP-220ENST00000442730 TCF4P15884 667 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 IL1R2P27930 398 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 CD38P28907 300 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 GKP32189 559 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 NUDT1P36639 197 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 NEK3P51956 506 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 FAM193AP78312 1265 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 TRIM14Q14142 442 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 ACAP1Q15027 740 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 PPP6R3Q5H9R7 873 aaPredicted RBP22.5■■□□□ 1.19
HDLBP-220ENST00000442730 ALKBH5Q6P6C2 394 aaKnown RBP22.5■■□□□ 1.19
HDLBP-220ENST00000442730 PRPF39Q86UA1 669 aaKnown RBP22.5■■□□□ 1.19
HDLBP-220ENST00000442730 VSTM4Q8IW00 320 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 RYBPQ8N488 228 aaPredicted RBP22.5■■□□□ 1.19
HDLBP-220ENST00000442730 CASKIN2Q8WXE0 1202 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 ARHGEF26Q96DR7 871 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 DMTF1Q9Y222 760 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 PCDHGB2Q9Y5G2 931 aa22.5■■□□□ 1.19
HDLBP-220ENST00000442730 H0Y8X5 98 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 KCNK3O14649 394 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 ADRB3P13945 408 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 NDST2P52849 883 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 SNRPD1P62314 119 aaKnown RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 SIM1P81133 766 aaPredicted RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 SETMARQ53H47 684 aaPredicted RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 ATXN7L2Q5T6C5 722 aaPredicted RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 NEK5Q6P3R8 708 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 PARS2Q7L3T8 475 aaKnown RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 HORMAD1Q86X24 394 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 NIPA2Q8N8Q9 360 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 CELF6Q96J87 481 aaKnown RBP22.49■■□□□ 1.19
HDLBP-220ENST00000442730 LRIG1Q96JA1 1093 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 GDAP1L1Q96MZ0 367 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 NUP85Q9BW27 656 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 PDFQ9HBH1 243 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 DONSONQ9NYP3 566 aa22.49■■□□□ 1.19
HDLBP-220ENST00000442730 TPRP12270 2363 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms