RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KRT1P04264 644 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CYP21A2P08686 494 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PSKH1P11801 424 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 IL1R1P14778 569 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ITIH2P19823 946 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GARTP22102 1010 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ACAT1P24752 427 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RECQLP46063 649 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 PXNP49023 591 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 BCAR1P56945 870 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SRP54P61011 504 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RPL26P61254 145 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SSTP61278 116 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 RPP38P78345 283 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ENPEPQ07075 957 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TRAP1Q12931 704 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 STX5Q13190 355 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ELOAQ14241 798 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SPCS2Q15005 226 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DLG2Q15700 870 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MEA1Q16626 185 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NRF1Q16656 503 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PPP1R3AQ16821 1122 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 UGP2Q16851 508 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 AAK1Q2M2I8 961 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FSCBQ5H9T9 825 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 WDR44Q5JSH3 913 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 AARS2Q5JTZ9 985 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 FAM26DQ5JW98 314 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TCHHL1Q5QJ38 904 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ARMC4Q5T2S8 1044 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTC39BQ5VTQ0 682 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 CACHD1Q5VU97 1274 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PLPP4Q5VZY2 271 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTBK2Q6IQ55 1244 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 APOBEC3HQ6NTF7 200 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 UGT3A1Q6NUS8 523 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SHQ1Q6PI26 577 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 CENPUQ71F23 418 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 FAM83AQ86UY5 434 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 JAMLQ86YT9 394 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TPH2Q8IWU9 490 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SYTL1Q8IYJ3 562 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GALNT11Q8NCW6 608 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 RBM15BQ8NDT2 890 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 OR6J1Q8NGC5 347 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 OR6P1Q8NGX9 317 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PSMA8Q8TAA3 256 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF398Q8TD17 642 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FNIP1Q8TF40 1166 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTC17Q96AE7 1141 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 EGLN2Q96KS0 407 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF285Q96NJ3 590 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PANX3Q96QZ0 392 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PIP5K1AQ99755 562 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MTG1Q9BT17 334 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 MCMBPQ9BTE3 642 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTPALQ9BTX7 342 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ISCA1Q9BUE6 129 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PITHD1Q9GZP4 211 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 CSRNP2Q9H175 543 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TRABDQ9H4I3 376 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 EPS8L2Q9H6S3 715 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF696Q9H7X3 374 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 POLE4Q9NR33 117 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TMLHEQ9NVH6 421 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZDHHC7Q9NXF8 308 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PAQR5Q9NXK6 330 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 FNIP2Q9P278 1114 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KIF17Q9P2E2 1029 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZC3H7BQ9UGR2 993 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 AFF4Q9UHB7 1163 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC7A8Q9UHI5 535 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ADAMTS1Q9UHI8 967 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CYB5R1Q9UHQ9 305 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC24A2Q9UI40 661 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SERPINB13Q9UIV8 391 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SALL4Q9UJQ4 1053 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DNAJC12Q9UKB3 198 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PCDHA4Q9UN74 947 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CDC14AQ9UNH5 594 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GDAQ9Y2T3 454 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NEDD4P46934 1319 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ISPDA4D126 451 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CCDC182A6NF36 153 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FOXO6A8MYZ6 492 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MIF4GDA9UHW6 222 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 C19orf81C9J6K1 198 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PI4K2BG5E9Z4 385 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 BTN3A1O00481 513 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PODXLO00592 558 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RGS13O14921 159 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB5O15062 677 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MSI1O43347 362 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 CPNE3O75131 537 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TOP3BO95985 862 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 HMGN1P05114 100 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF806P0C7X5 589 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF286BP0CG31 522 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms