RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 NUDCD1Q96RS6 583 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CDK5RAP1Q96SZ6 601 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TMEM175Q9BSA9 504 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZYG11BQ9C0D3 744 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 DRC3Q9H069 523 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CDH19Q9H159 772 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 NOL6Q9H6R4 1146 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 IARS2Q9NSE4 1012 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 RBM22Q9NW64 420 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZNF212Q9UDV6 495 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 IPO11Q9UI26 975 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TLK1Q9UKI8 766 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 NYNRINQ9P2P1 1898 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CCDC195A0A1B0GUA6 201 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 HEATR9A2RTY3 570 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 F5H423 210 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 DFFAO00273 331 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 LIN7AO14910 233 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 HGSO14964 777 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ATP9BO43861 1147 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PENKP01210 267 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 EPOP01588 193 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 HLA-DQB2P05538 268 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 HOXB8P17481 243 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 KCNA4P22459 653 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 IDH3AP50213 366 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PAPOLAP51003 745 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TBX4P57082 545 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 SP3Q02447 781 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 BTKQ06187 659 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MSLNQ13421 630 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MBTPS1Q14703 1052 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PARP15Q460N3 678 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 FSCBQ5H9T9 825 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 VARS2Q5ST30 1063 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PIK3R6Q5UE93 754 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 LIPMQ5VYY2 423 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZNF280DQ6N043 979 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZNF280BQ86YH2 543 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PLD6Q8N2A8 252 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MCUR1Q96AQ8 359 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PRR11Q96HE9 360 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 RSRC1Q96IZ7 334 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CNDP1Q96KN2 507 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TSNARE1Q96NA8 513 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZNF599Q96NL3 588 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CCDC28BQ9BUN5 200 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TTLL2Q9BWV7 592 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PIH1D1Q9NWS0 290 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CORO1CQ9ULV4 474 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 RAP2CQ9Y3L5 183 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 L3MBTL1Q9Y468 752 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 B2RBV5 119 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 H7C4K7 107 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 HOXA2O43364 376 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 NPHS1O60500 1241 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 B4GALT3O60512 393 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 TOP3BO95985 862 aaKnown RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 AHSGP02765 367 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 PSMA3P25788 255 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 YWHAQP27348 245 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ARNTP27540 789 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 CPOXP36551 454 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 PGM1P36871 562 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 RAB10P61026 200 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 IL10RBQ08334 325 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 NOGQ13253 232 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 GPR17Q13304 367 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 OLIG2Q13516 323 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 GRM3Q14832 879 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 E2F5Q15329 346 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 PAN2Q504Q3 1202 aaKnown RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 MS4A13Q5J8X5 152 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 TMCO4Q5TGY1 634 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ARHGAP36Q6ZRI8 547 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ZCCHC23Q6ZST2 131 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 MAVSQ7Z434 540 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 CMC1Q7Z7K0 106 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ADGRG6Q86SQ4 1221 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 C14orf80Q86SX3 495 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 CPSF7Q8N684 471 aaKnown RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 OVCA2Q8WZ82 227 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 AZIN2Q96A70 460 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 CMTM5Q96DZ9 223 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 FICDQ9BVA6 458 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ILKAPQ9H0C8 392 aaPredicted RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 SIK2Q9H0K1 926 aa8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 TLR8Q9NR97 1041 aaKnown RBP8.31□□□□□ -1.08
SPIRE1-204ENST00000440472 STX18Q9P2W9 335 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms