RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SMOC2Q9H3U7 446 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 THAP9Q9H5L6 903 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 PSTPIP2Q9H939 334 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 DBNDD1Q9H9R9 158 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 EXOC1Q9NV70 894 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 PIH1D1Q9NWS0 290 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TAB2Q9NYJ8 693 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 VSX1Q9NZR4 365 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 SH3BP4Q9P0V3 963 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 RNF7Q9UBF6 113 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF215Q9UL58 517 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMX2Q9Y320 296 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC88AQ3V6T2 1871 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 BAZ2AQ9UIF9 1905 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYH13Q9UKX3 1938 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 SBF2Q86WG5 1849 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 C10orf71Q711Q0 1435 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 UBR3Q6ZT12 1888 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 A0A1W2PPL8 197 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM49BA6NDI0 452 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 DDTLA6NHG4 134 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRRT4C9JH25 899 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 F5H6K3 240 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 M0R3H8 397 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 EDIL3O43854 480 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 KIF5CO60282 957 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 USP1O94782 785 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 IL18RAPO95256 599 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TDP2O95551 362 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 FGFR1OPO95684 399 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 ERBB2P04626 1255 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 GYPCP04921 128 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 HSD3B1P14060 373 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 GCFC2P16383 781 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT9P35527 623 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC16A2P36021 539 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC1A4P43007 532 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 HSPA7P48741 367 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PDE6CP51160 858 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 SOX8P57073 446 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 HTRA4P83105 476 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 ICA1Q05084 483 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 KLRC3Q07444 240 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 GALNT1Q10472 559 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TCP10Q12799 353 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 STK4Q13043 487 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRAF1Q13077 416 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 BLMHQ13867 455 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TUBB2AQ13885 445 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CNGA2Q16280 664 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 UBE2SQ16763 222 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 MPEG1Q2M385 716 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 QRICH1Q2TAL8 776 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 MGAT5BQ3V5L5 792 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM119Q4V9L6 283 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC38Q502W7 563 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 KHDC1LQ5JSQ8 128 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCID2Q5JVF3 399 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 MORN5Q5VZ52 161 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PAPD7Q5XG87 772 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 ANKRD40Q6AI12 368 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TTI2Q6NXR4 508 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 RAD9BQ6WBX8 426 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM179Q6ZVK1 233 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CACNA2D3Q8IZS8 1091 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CSGALNACT2Q8N6G5 542 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CELF5Q8N6W0 485 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCSK9Q8NBP7 692 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 MNS1Q8NEH6 495 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 OR8K1Q8NGG5 319 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 DENND1AQ8TEH3 1009 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRRC15Q8TF66 581 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 SCARB1Q8WTV0 552 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 RAD54LQ92698 747 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 IQCDQ96DY2 449 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 DAZAP1Q96EP5 407 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TUBGCP2Q9BSJ2 902 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 DESI2Q9BSY9 194 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TUBB2BQ9BVA1 445 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PNPLA8Q9NP80 782 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 ABHD10Q9NUJ1 306 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 STK32BQ9NY57 414 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 DDX25Q9UHL0 483 aaKnown RBP3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 GJD2Q9UKL4 321 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 CAPN11Q9UMQ6 739 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCDHA12Q9UN75 941 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 TBC1D30Q9Y2I9 924 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCDHA1Q9Y5I3 950 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 KAT6AQ92794 2004 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYH2Q9UKX2 1941 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRRC37AA6NMS7 1700 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 NAV1Q8NEY1 1877 aa3.69□□□□□ -1.82
HMGB3P11-201ENST00000440127 LTBP1Q14766 1721 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 DDX60LQ5H9U9 1706 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP3A7-CYP3A51PA0A087WV96 503 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYMKA6NI61 221 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 LGALS16A8MUM7 142 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 EFCAB8A8MWE9 144 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 VWC2LB2RUY7 222 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 H7C1Q1 480 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms