RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 NACA2Q9H009 215 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 MAGEH1Q9H213 219 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 PDFQ9HBH1 243 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 ALG13Q9NP73 1137 aaKnown RBP11.95□□□□□ -0.5
SMAD3-202ENST00000439724 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 OBSL1O75147 1896 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 SIN3BO75182 1162 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 DNAJC8O75937 253 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-202ENST00000439724 STC2O76061 302 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 BAIAP3O94812 1187 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 UBOX5O94941 541 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 BPGMP07738 259 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 MMP2P08253 660 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 NEFHP12036 1026 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ITGB8P26012 769 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 TYK2P29597 1187 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ALDH3A1P30838 453 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 PPM1AP35813 382 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ACVRL1P37023 503 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 CDH4P55283 916 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 DSC2Q02487 901 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 PLD1Q13393 1074 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 LBRQ14739 615 aaKnown RBP11.94□□□□□ -0.5
SMAD3-202ENST00000439724 POU6F1Q14863 301 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ATG16L1Q676U5 607 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 KIAA0930Q6ICG6 404 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-202ENST00000439724 FSTL4Q6MZW2 842 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 CHST9Q7L1S5 443 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 DCLK2Q8N568 766 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ARRDC2Q8TBH0 407 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 E2F7Q96AV8 911 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF778Q96MU6 729 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 C7orf26Q96N11 449 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-202ENST00000439724 TRIM55Q9BYV6 548 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 SNX15Q9NRS6 342 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 IARS2Q9NSE4 1012 aaKnown RBP11.94□□□□□ -0.5
SMAD3-202ENST00000439724 TREX1Q9NSU2 369 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 EMCNQ9ULC0 261 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
SMAD3-202ENST00000439724 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 H3BNC9 293 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 PLIN3O60664 434 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 DCTN3O75935 186 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 MPOP05164 745 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 CSF2RAP15509 400 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 PAMP19021 973 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 HOXD9P28356 352 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 CD86P42081 329 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 ARCN1P48444 511 aaKnown RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 CSRP3P50461 194 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 MAXP61244 160 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 CREMQ03060 361 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 GNA12Q03113 381 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 BNIP1Q12981 228 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 SMAD1Q15797 465 aaKnown RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 TAF12Q16514 161 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 UGP2Q16851 508 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 N4BP2L1Q5TBK1 243 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 ALG1LQ6GMV1 187 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 RFWD3Q6PCD5 774 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 TMCO2Q7Z6W1 182 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF354CQ86Y25 554 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 MICALL1Q8N3F8 863 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 PGBD5Q8N414 524 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 FITM2Q8N6M3 262 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 TRIM43Q96BQ3 446 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 PAWRQ96IZ0 340 aaKnown RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 VPS39Q96JC1 886 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 PRICKLE1Q96MT3 831 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 GPR22Q99680 433 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 DDX50Q9BQ39 737 aaKnown RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 MECRQ9BV79 373 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 RHOJQ9H4E5 214 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 STK39Q9UEW8 545 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 INSL5Q9Y5Q6 135 aa11.93□□□□□ -0.5
SMAD3-202ENST00000439724 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-202ENST00000439724 HEATR9A2RTY3 570 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 PRRG1O14668 218 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 CLDN11O75508 207 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 PAPSS2O95340 614 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-202ENST00000439724 LATS1O95835 1130 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 TOP3BO95985 862 aaKnown RBP11.92□□□□□ -0.5
SMAD3-202ENST00000439724 GSRP00390 522 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 KLKB1P03952 638 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 PROCP04070 461 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 ARNTP27540 789 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 CORO1AP31146 461 aaKnown RBP11.92□□□□□ -0.5
SMAD3-202ENST00000439724 ELF1P32519 619 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 CHRNA4P43681 627 aa11.92□□□□□ -0.5
SMAD3-202ENST00000439724 SERPINH1P50454 418 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms