RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 HSDL1Q3SXM5 330 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CLEC6AQ6EIG7 209 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 TTC30AQ86WT1 665 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 DENND6AQ8IWF6 608 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 COPS5Q92905 334 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 EPB41L1Q9H4G0 881 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 PLK2Q9NYY3 685 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 VTI1BQ9UEU0 232 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CNOT6Q9ULM6 557 aaKnown RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 STAP1Q9ULZ2 295 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 SLCO1B7G3V0H7 640 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ZBTB24O43167 697 aaPredicted RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 GMNNO75496 209 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 UGT1A1P22309 533 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 UGT1A4P22310 534 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 NMBRP28336 390 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 UGT1A3P35503 534 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 UGT1A5P35504 534 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 DPP6P42658 865 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 RABGGTBP53611 331 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 FKBP1AP62942 108 aaKnown RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 NIPAL4Q0D2K0 466 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 MAPK11Q15759 364 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 TAZQ16635 292 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 PPP1R3AQ16821 1122 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CYP51A1Q16850 503 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 SOWAHAQ2M3V2 549 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ZNF470Q6ECI4 717 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 LCLAT1Q6UWP7 414 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 PSTKQ8IV42 348 aaKnown RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 EXOC8Q8IYI6 725 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 PARP8Q8N3A8 854 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 PCYOX1LQ8NBM8 494 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 BPIFB6Q8NFQ5 453 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 SLC2A14Q8TDB8 520 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 NRBF2Q96F24 287 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 DGCR6LQ9BY27 220 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 TRIM15Q9C019 465 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CCDC68Q9H2F9 335 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 DPEP3Q9H4B8 488 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 ZBTB26Q9HCK0 441 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 OXSMQ9NWU1 459 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 GMPR2Q9P2T1 348 aaKnown RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 CDK5RAP2Q96SN8 1893 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 FAM95CA0A1B0GW59 222 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 GNGT2O14610 69 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 TADA2AO75478 443 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CABYRO75952 493 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ATG7O95352 703 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 BCL10O95999 233 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 SNRPB2P08579 225 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 GNAO1P09471 354 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CYP3A5P20815 502 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 FASP25445 335 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 BAG6P46379 1132 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 CDH13P55290 713 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 OCA2Q04671 838 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 SAMD4BQ5PRF9 694 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 EGFLAMQ63HQ2 1017 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DCAF15Q66K64 600 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 REP15Q6BDI9 236 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 OLFML1Q6UWY5 402 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ILDR2Q71H61 639 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ISOC1Q96CN7 298 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 FBXL20Q96IG2 436 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 COX4I2Q96KJ9 171 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DNAI2Q9GZS0 605 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DEFB129Q9H1M3 183 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DAPK2Q9UIK4 370 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 RNF11Q9Y3C5 154 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DGKBQ9Y6T7 804 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CROCCQ5TZA2 2017 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TAF1LQ8IZX4 1826 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 KLRG2A4D1S0 409 aaPredicted RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 G3V2L1 256 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 MDM4O15151 490 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CBFA2T3O75081 653 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 GSRP00390 522 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 C1QAP02745 245 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 MLNP12872 115 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 MAGEA8P43361 318 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 PNPLA1Q8N8W4 532 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 SHCBP1Q8NEM2 672 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TCF12Q99081 682 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 PRMT7Q9NVM4 692 aaPredicted RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 BLOC1S6Q9UL45 172 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TLL2Q9Y6L7 1015 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms