RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HMCESQ96FZ2 354 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 TM9SF3Q9HD45 589 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 UVRAGQ9P2Y5 699 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 LEFTY1O75610 366 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 GSRP00390 522 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 H2AFZP0C0S5 128 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 HCAR3P49019 387 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 SNRPD1P62314 119 aaKnown RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 RACK1P63244 317 aaKnown RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 SERINC3Q13530 473 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 ASTE1Q2TB18 679 aaPredicted RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 INO80DQ53TQ3 878 aaPredicted RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 H2AFVQ71UI9 128 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 ZNF564Q8TBZ8 553 aaPredicted RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 LRIG1Q96JA1 1093 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 CCDC42Q96M95 316 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 TM6SF2Q9BZW4 377 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 PREBQ9HCU5 417 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 DNAAF2Q9NVR5 837 aaKnown RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 HECAQ9UBI9 543 aaPredicted RBP25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 LCMT1Q9UIC8 334 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 ACTL7AQ9Y615 435 aa25.18■■□□□ 1.62
RAPGEF1-206ENST00000438647 C10orf142B7Z368 130 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 PLK4O00444 970 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 CER1O95813 267 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 NUDT1P36639 197 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 ARL4AP40617 200 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 ADKP55263 362 aaKnown RBP25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 DPYSL2Q16555 572 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 ADAT2Q7Z6V5 191 aaKnown RBP25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 RYBPQ8N488 228 aaPredicted RBP25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 OR2AP1Q8NGE2 309 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 TEKT4Q8WW24 435 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 SKA1Q96BD8 255 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 ORAI3Q9BRQ5 295 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 HDAC8Q9BY41 377 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 LRRC19Q9H756 370 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 CTTNBP2NLQ9P2B4 639 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 WASF2Q9Y6W5 498 aa25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 CNOT1A5YKK6 2376 aaKnown RBP25.17■■□□□ 1.62
RAPGEF1-206ENST00000438647 ARHGAP42A6NI28 874 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 AKR1B15C9JRZ8 316 aaPredicted RBP25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 H3BRJ5 948 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 TMCC1O94876 653 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 ERCC2P18074 760 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 KCNA4P22459 653 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 IL1R2P27930 398 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 CSNK1EP49674 416 aaKnown RBP25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 SMTNL2Q2TAL5 461 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 KCNT1Q5JUK3 1230 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 PIP5KL1Q5T9C9 394 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 LEKR1Q6ZMV7 388 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 ERN2Q76MJ5 926 aaKnown RBP25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 PRPF39Q86UA1 669 aaKnown RBP25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 LZTR1Q8N653 840 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 HSPH1Q92598 858 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 ARRDC3Q96B67 414 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 BTBD6Q96KE9 485 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 ZDHHC6Q9H6R6 413 aa25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.16■■□□□ 1.62
RAPGEF1-206ENST00000438647 A0A1B0GVT2 93 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 LATO43561 262 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 CSRP1P21291 193 aaKnown RBP25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 ITGB7P26010 798 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 RAD51Q06609 339 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 SLC14A1Q13336 389 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 HADHQ16836 314 aaKnown RBP25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 NEK5Q6P3R8 708 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 TRIM69Q86WT6 500 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 GDAP1L1Q96MZ0 367 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 NHEJ1Q9H9Q4 299 aaPredicted RBP25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 CWC15Q9P013 229 aaKnown RBP25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 SLCO1B1Q9Y6L6 691 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 ADAMTS9Q9P2N4 1935 aa25.15■■□□□ 1.62
RAPGEF1-206ENST00000438647 UPK3BL1B0FP48 263 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 UPK3BL2E5RIL1 263 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 KCNK5O95279 499 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 POP4O95707 220 aaKnown RBP25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 IGSF6O95976 241 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 TMEM253P0C7T8 217 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 RARAP10276 462 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 NEK3P51956 506 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 RHOAP61586 193 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 PPP2CBP62714 309 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 PPP2CAP67775 309 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBX2Q13207 712 aaPredicted RBP25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 DPYSQ14117 519 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 OR2I1PQ8NGU4 316 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 CELF6Q96J87 481 aaKnown RBP25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 CHP1Q99653 195 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 OSBPL1AQ9BXW6 950 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 KLC2Q9H0B6 622 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 SLC32A1Q9H598 525 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 UBA2Q9UBT2 640 aaPredicted RBP25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 DMTF1Q9Y222 760 aa25.14■■□□□ 1.62
RAPGEF1-206ENST00000438647 ASCC3Q8N3C0 2202 aaKnown RBP25.14■■□□□ 1.61
RAPGEF1-206ENST00000438647 MED19A0JLT2 244 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 TCF4P15884 667 aa25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 SSR1P43307 286 aaKnown RBP25.13■■□□□ 1.61
RAPGEF1-206ENST00000438647 NOVA1P51513 510 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms