RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 H0YIV9 168 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TNPO2O14787 897 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TNFSF14O43557 240 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALDH1A2O94788 518 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 IPO13O94829 963 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SCAF4O95104 1147 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 LETM1O95202 739 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 MATN4O95460 622 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NPPAP01160 153 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALPPP05187 535 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPLP2P05387 115 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBBP07437 444 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TPM1P09493 284 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A15PP0C7V4 464 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A14PP0C7W9 464 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALPPL2P10696 532 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FDPSP14324 419 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CSF2RAP15509 400 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 EGR1P18146 543 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 HK1P19367 917 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NR4A1P22736 598 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PTPN3P26045 913 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPA1P27694 616 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 BSGP35613 385 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PPARGP37231 505 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TAGLN2P37802 199 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 USP8P40818 1118 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 GCLCP48506 637 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PITPNBP48739 271 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FNTBP49356 437 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 KRTAP10-11P60412 298 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBB4BP68371 445 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RBM6P78332 1123 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TDGQ13569 410 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CAMK1Q14012 370 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NTRK2Q16620 822 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NFIL3Q16649 462 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 DGKDQ16760 1214 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC57Q2TAC2 916 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 BTBD16Q32M84 506 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FILIP1LQ4L180 1135 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 AARDQ4LEZ3 155 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 KCNT1Q5JUK3 1230 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CATSPEREQ5SY80 951 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RAP1GAP2Q684P5 730 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SP5Q6BEB4 398 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TMEM270Q6UE05 265 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CLEC2AQ6UVW9 174 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RHOUQ7L0Q8 258 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CACNA2D4Q7Z3S7 1137 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TLK2Q86UE8 772 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PPP1R3BQ86XI6 285 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC13Q8IYE1 715 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SIX6OS1Q8N1H7 587 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SETD6Q8TBK2 473 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC13A3Q8WWT9 602 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRPF31Q8WWY3 499 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SGCDQ92629 289 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CORO2AQ92828 525 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 C3orf49Q96BT1 292 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 EDC3Q96F86 508 aaKnown RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 EPSTI1Q96J88 318 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 MRGPRX4Q96LA9 322 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 RMDN2Q96LZ7 410 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NR1H4Q96RI1 486 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 LBHD1Q9BQE6 289 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 BCL7BQ9BQE9 202 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBB6Q9BUF5 446 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 LRRCC1Q9C099 1032 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NACA2Q9H009 215 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PCDHAC1Q9H158 963 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 VPS16Q9H269 839 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 C17orf75Q9HAS0 396 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SCPEP1Q9HB40 452 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 PCDHB16Q9NRJ7 776 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 KCNH7Q9NS40 1196 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 GIMAP4Q9NUV9 329 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 POLR3BQ9NW08 1133 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 SOHLH2Q9NX45 425 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CYP39A1Q9NYL5 469 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TLK1Q9UKI8 766 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZMYND8Q9ULU4 1186 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 ASB1Q9Y576 335 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 CDY2AQ9Y6F7 541 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 NUMBLQ9Y6R0 609 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 A0A0A6YYK5 440 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A20PA6NIJ5 464 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 F8VZ95 297 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 O00370 1275 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 BTN3A1O00481 513 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 CXCL11O14625 94 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 CD3EAPO15446 510 aaKnown RBP3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 POLR2DO15514 142 aaKnown RBP3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPOPO43791 374 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 GPRIN2O60269 458 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPAG6O75602 509 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 RECQL4O94761 1208 aa3.75□□□□□ -1.81
HMGB1P12-201ENST00000438594 RECQL5O94762 991 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms