RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SERHLQ9NQF3 203 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 HIST1H2ABP04908 130 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 GRM5P41594 1212 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 IL5RAQ01344 420 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 WDR59Q6PJI9 974 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 HIST3H2AQ7L7L0 130 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 DDHD1Q8NEL9 900 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RDH11Q8TC12 318 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 DLG3Q92796 817 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 HIST1H2ACQ93077 130 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 LZTS1Q9Y250 596 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 SESN1Q9Y6P5 492 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RPL14P50914 215 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 EPHX4Q8IUS5 362 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 UTP15Q8TED0 518 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 CNGB3Q9NQW8 809 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 SSTR1P30872 391 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 TRIM16LQ309B1 348 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 SORCS3Q9UPU3 1222 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 POLR1DQ9Y2S0 133 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 COPZ1P61923 177 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 NEPROQ6NW34 567 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 MRPL57Q9BQC6 102 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RPS6KA6Q9UK32 745 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 TPRKBQ9Y3C4 175 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 INPP4BO15327 924 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 PEX1O43933 1283 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 INAQ16352 499 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RAP1GAP2Q684P5 730 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RGL4Q8IZJ4 473 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 ZNHIT2Q9UHR6 403 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 GCATO75600 419 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 LDLRP01130 860 aa16.04■□□□□ 0.16
PTPN13-204ENST00000436978 WDR36Q8NI36 951 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 ZFRQ96KR1 1074 aaKnown RBP16.04■□□□□ 0.16
PTPN13-204ENST00000436978 RHBDL3P58872 404 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 DLG4P78352 724 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 C9orf57Q5W0N0 161 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 SH3BP5LQ7L8J4 393 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ADHFE1Q8IWW8 467 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 POMGNT2Q8NAT1 580 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ITFG1Q8TB96 612 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ACMSDQ8TDX5 336 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 HAS1Q92839 578 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 COX10Q12887 443 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 SQLEQ14534 574 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ZC3H12AQ5D1E8 599 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 COMMD2Q86X83 199 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 OR8D1Q8WZ84 308 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF75CPQ92670 426 aaPredicted RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 MRPS26Q9BYN8 205 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 INTS7Q9NVH2 962 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 IGFBP4P22692 258 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 PIK3R1P27986 724 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 MATKP42679 507 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ACSM2AQ08AH3 577 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 PSMD5Q16401 504 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ACSM2BQ68CK6 577 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF621Q6ZSS3 439 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ULK2Q8IYT8 1036 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 AMD1P17707 334 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 EPB41L4BQ9H329 900 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 SLC28A1O00337 649 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 MARSP56192 900 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 STX4Q12846 297 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 PFKFB4Q16877 469 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 TYW3Q6IPR3 259 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 FAM180AQ6UWF9 173 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CERS2Q96G23 380 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 A0A087X0B3 334 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 F8VP50 259 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ABHD2P08910 425 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF844Q08AG5 666 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CENPXA8MT69 81 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 RECQL5O94762 991 aaPredicted RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 FGD3Q5JSP0 725 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 CD101Q93033 1021 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
PTPN13-204ENST00000436978 SIK3Q9Y2K2 1263 aa16.03■□□□□ 0.16
PTPN13-204ENST00000436978 LIASO43766 372 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 CLPTM1O96005 669 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 ITGA1P56199 1179 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 C21orf59P57076 290 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 BMT2Q1RMZ1 405 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 OR6Y1Q8NGX8 325 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
PTPN13-204ENST00000436978 H3BN98 237 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms