RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 MYF5P13349 255 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 SLC9A1P19634 815 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 RBMS1P29558 406 aaKnown RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 TPD52L1Q16890 204 aaPredicted RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ALFQ53S48 1182 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 C3orf38Q5JPI3 329 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ACBD5Q5T8D3 534 aaPredicted RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 GCNT7Q6ZNI0 430 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 PARGQ86W56 976 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ELOA2Q8IYF1 753 aaPredicted RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 RYBPQ8N488 228 aaPredicted RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 PSMB7Q99436 277 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 HDAC8Q9BY41 377 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 SLC17A9Q9BYT1 436 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZDHHC6Q9H6R6 413 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ATP13A1Q9HD20 1204 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 MPP6Q9NZW5 540 aa13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZFR2Q9UPR6 939 aaKnown RBP13.68□□□□□ -0.22
CDC42EP1-204ENST00000434728 ATMQ13315 3056 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 K7ESM1 405 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 FPGTO14772 594 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ADRB3P13945 408 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 PLA2G2AP14555 144 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 BMP6P22004 513 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 RABIFP47224 123 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 LSSP48449 732 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ERVPABLB-1P60509 514 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 RHDQ02161 417 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 CDKN3Q16667 212 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 FOXR1Q6PIV2 292 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 KYAT3Q6YP21 454 aaKnown RBP13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 DPY19L3Q6ZPD9 716 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ABI3BPQ7Z7G0 1075 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 SLC22A18ASQ8N1D0 253 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZNF843Q8N446 348 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 WDTC1Q8N5D0 677 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZNF548Q8NEK5 533 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 OR7D4Q8NG98 312 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 SHC3Q92529 594 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 GLMNQ92990 594 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 TRIM44Q96DX7 344 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 HEPHQ9BQS7 1158 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 CPNE5Q9HCH3 593 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 PLCB1Q9NQ66 1216 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 TMEM51Q9NW97 253 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 ARHGEF38Q9NXL2 777 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 HS3ST3A1Q9Y663 406 aa13.67□□□□□ -0.22
CDC42EP1-204ENST00000434728 FAM170AA1A519 330 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 AQP9O43315 295 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 PAK4O96013 591 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 ITGB7P26010 798 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 CXCR3P49682 368 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 THOP1P52888 689 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 BPIFB4P59827 614 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 APBA1Q02410 837 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 TYRO3Q06418 890 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 CDCP2Q5VXM1 449 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 SASS6Q6UVJ0 657 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 NPY6RQ99463 290 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 CEP44Q9C0F1 390 aa13.66□□□□□ -0.22
CDC42EP1-204ENST00000434728 COL6A6A6NMZ7 2263 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 SPTY2D1-AS1A0A0U1RR47 76 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 ILVBLA1L0T0 632 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 POM121BA6NF01 834 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 GOLGA8SH3BPF8 625 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 PES1O00541 588 aaKnown RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 CSF2P04141 144 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 NME1P15531 152 aaKnown RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 JUNDP17535 347 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 TFE3P19532 575 aaPredicted RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 L1CAMP32004 1257 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 RPIAP49247 311 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 SERPINH1P50454 418 aaKnown RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 CCNHP51946 323 aaPredicted RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 POLD3Q15054 466 aaPredicted RBP13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 NR0B2Q15466 257 aa13.65□□□□□ -0.22
CDC42EP1-204ENST00000434728 DEFB133Q30KQ1 61 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms