RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PRUNE1Q86TP1 453 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 PCDH20Q8N6Y1 951 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 ZNF513Q8N8E2 541 aaPredicted RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 TSEN2Q8NCE0 465 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 ISG20Q96AZ6 181 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 MYO19Q96H55 970 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 MGME1Q9BQP7 344 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 POLR1EQ9GZS1 481 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 THAP10Q9P2Z0 257 aaPredicted RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 LHX3Q9UBR4 397 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 ASIC3Q9UHC3 531 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 RSPH14Q9UHP6 348 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 SLCO3A1Q9UIG8 710 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 MRPS17Q9Y2R5 130 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 NEU2Q9Y3R4 380 aa23.58■■□□□ 1.37
SMARCAL1-208ENST00000434435 KRBA1A5PL33 1030 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 IGSF6O95976 241 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 ZSCAN5DPP0CG00 497 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 HNRNPLP14866 589 aaKnown RBP eCLIP23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 RPL22P35268 128 aaKnown RBP23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 SEC13P55735 322 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 ITKQ08881 620 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 TRIP13Q15645 432 aaPredicted RBP23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 GLE1Q53GS7 698 aaKnown RBP23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 FAM182AQ5T1J6 154 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 PGBD5Q8N414 524 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 KCNV2Q8TDN2 545 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 TRIM51Q9BSJ1 452 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 LRRC1Q9BTT6 524 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 TM6SF2Q9BZW4 377 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 GBA3Q9H227 469 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 GLOD4Q9HC38 313 aa23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 NDRG2Q9UN36 371 aaKnown RBP23.57■■□□□ 1.36
SMARCAL1-208ENST00000434435 NFKB1P19838 968 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 CD72P21854 359 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 KIR2DL1P43626 348 aaPredicted RBP23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 VPS41P49754 854 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 STARD6P59095 220 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 MAXP61244 160 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 MRPS25P82663 173 aaKnown RBP23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 TEX35Q5T0J7 233 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 SERPINA13PQ6UXR4 307 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 SIX5Q8N196 739 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 EXOC2Q96KP1 924 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 RAB17Q9H0T7 212 aa23.56■■□□□ 1.36
SMARCAL1-208ENST00000434435 EFCAB8A8MWE9 144 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 TTC34A8MYJ7 566 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 MUSKO15146 869 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 GSRP00390 522 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 PSMB4P28070 264 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 CD68P34810 354 aaPredicted RBP23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 TIE1P35590 1138 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 FDFT1P37268 417 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 SNRPD1P62314 119 aaKnown RBP23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 MRPS21P82921 87 aaKnown RBP23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 ZXDAP98168 799 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 GPS1Q13098 491 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 CCINQ13939 588 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 DGKKQ5KSL6 1271 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 EMC10Q5UCC4 262 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 ALG1LQ6GMV1 187 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 TRMT11Q7Z4G4 463 aaKnown RBP23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 FRS2Q8WU20 508 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 GDAP1L1Q96MZ0 367 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 PPP1R2P1Q96PQ5 205 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 UHRF1Q96T88 793 aaPredicted RBP23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 SLC25A51Q9H1U9 297 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 TNKS2Q9H2K2 1166 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 HCN2Q9UL51 889 aa23.55■■□□□ 1.36
SMARCAL1-208ENST00000434435 IL12RB1P42701 662 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 RECQLP46063 649 aaPredicted RBP23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 RGRP47804 291 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 TUBB4BP68371 445 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 NSUN2Q08J23 767 aaKnown RBP eCLIP23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 LRRC32Q14392 662 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 KCTD19Q17RG1 926 aaPredicted RBP23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 PARP6Q2NL67 630 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 Q6ZVU0 165 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 CHPFQ8IZ52 775 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 OR2AP1Q8NGE2 309 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 LRRC45Q96CN5 670 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 FCRL5Q96RD9 977 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 NUDCD1Q96RS6 583 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 SEMA3CQ99985 751 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 TMEM245Q9H330 911 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 LTB4R2Q9NPC1 389 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 SCUBE2Q9NQ36 999 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 RAB6BQ9NRW1 208 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 CACNA2D2Q9NY47 1150 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 UTP11Q9Y3A2 253 aaKnown RBP23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 STON1Q9Y6Q2 735 aa23.54■■□□□ 1.36
SMARCAL1-208ENST00000434435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 EDDM13A0A1B0GTR0 161 aa23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 KANSL1LA0AUZ9 987 aa23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 ZNF821O75541 412 aaPredicted RBP23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 HEXIM1O94992 359 aaKnown RBP23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 METTL18O95568 372 aa23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 CR2P20023 1033 aa23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 CES1P23141 567 aa23.53■■□□□ 1.36
SMARCAL1-208ENST00000434435 PRKCHP24723 683 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms