RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RRN3Q9NYV6 651 aa14.54□□□□□ -0.08
SMARCE1-205ENST00000431889 PCDHB1Q9Y5F3 818 aa14.54□□□□□ -0.08
SMARCE1-205ENST00000431889 PCDHGA1Q9Y5H4 931 aa14.54□□□□□ -0.08
SMARCE1-205ENST00000431889 RAI2Q9Y5P3 530 aa14.54□□□□□ -0.08
SMARCE1-205ENST00000431889 SHROOM3Q8TF72 1996 aa14.54□□□□□ -0.08
SMARCE1-205ENST00000431889 IGLV3-10A0A075B6K4 115 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 YKT6O15498 198 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 CD160O95971 181 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 PRNPP04156 253 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 HNRNPA2B1P22626 353 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 AKT2P31751 481 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 SERPINH1P50454 418 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 POLR2FP61218 127 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 CCDC14Q49A88 953 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 ATXN7L2Q5T6C5 722 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 PARS2Q7L3T8 475 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 PYROXD2Q8N2H3 581 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 OXR1Q8N573 874 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 TMIEQ8NEW7 156 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 BMFQ96LC9 184 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 C1orf74Q96LT6 269 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 CCDC114Q96M63 670 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 STK33Q9BYT3 514 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 NOCTQ9UK39 431 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 KNTC1P50748 2209 aa14.53□□□□□ -0.08
SMARCE1-205ENST00000431889 IGLON5A6NGN9 336 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 BRINP1O60477 761 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 GIMD1P0DJR0 217 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 ADRB3P13945 408 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 ABL2P42684 1182 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 FMO1Q01740 532 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 CARD16Q5EG05 197 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 CRTC1Q6UUV9 634 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 BNIPLQ7Z465 357 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 IQCHQ86VS3 1027 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 ZNF354CQ86Y25 554 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 NXPE2Q96DL1 559 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 HAPLN3Q96S86 360 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 PCDHB18PQ96TA0 734 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 DKK4Q9UBT3 224 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 KLF15Q9UIH9 416 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 CLCA2Q9UQC9 943 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 FADS3Q9Y5Q0 445 aa14.52□□□□□ -0.08
SMARCE1-205ENST00000431889 ILVBLA1L0T0 632 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 KRIT1O00522 736 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 MAGEC1O60732 1142 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 PIAS2O75928 621 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ERCC5P28715 1186 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 NEK3P51956 506 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 CCDC173Q0VFZ6 552 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ACAP1Q15027 740 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 KRT31Q15323 416 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 HEPHQ9BQS7 1158 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 HDAC8Q9BY41 377 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 SLC17A9Q9BYT1 436 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 KLC2Q9H0B6 622 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 SEPT11Q9NVA2 429 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 KLHL11Q9NVR0 708 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 PAXBP1Q9Y5B6 917 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 A0A087WV48 116 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 SCAMP1O15126 338 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 MPOP05164 745 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 UGT2B4P06133 528 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ACP1P24666 158 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 L1CAMP32004 1257 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ADRA1BP35368 520 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ABCG1P45844 678 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 MTA1Q13330 715 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ZNF211Q13398 564 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 TMEM259Q4ZIN3 620 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 RETSATQ6NUM9 610 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 NYAP1Q6ZVC0 841 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 FAM172AQ8WUF8 416 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ARHGEF2Q92974 986 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 APOLD1Q96LR9 279 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 PCMTD1Q96MG8 357 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 TCEAL2Q9H3H9 227 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 DACH1Q9UI36 760 aa14.51□□□□□ -0.09
SMARCE1-205ENST00000431889 ASXL3Q9C0F0 2248 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 NEMP1O14524 444 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 SPINT1O43278 529 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 LRIG2O94898 1065 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 ZIC2O95409 532 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 LSM8O95777 96 aaKnown RBP14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 MT-CO3P00414 261 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 C1SP09871 688 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 SDC4P31431 198 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 CLCN6P51797 869 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 HDAC4P56524 1084 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 CDR2Q01850 454 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 OVGP1Q12889 678 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 C1orf61Q13536 156 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 FZD2Q14332 565 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 DEFB133Q30KQ1 61 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 SCYL2Q6P3W7 929 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 DNAAF5Q86Y56 855 aa14.5□□□□□ -0.09
SMARCE1-205ENST00000431889 RBFAQ8N0V3 343 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms