RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PAFAH1B1P43034 410 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 RASSF2P50749 326 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 NAP1L1P55209 391 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 ARHGAP8P85298 464 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SHC2P98077 582 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 RHAGQ02094 409 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 TRAF2Q12933 501 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 GAB1Q13480 694 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 MTX1Q13505 466 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SEC23BQ15437 767 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 AWAT1Q58HT5 328 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SLC30A9Q6PML9 568 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 IL20RBQ6UXL0 311 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 KDELC2Q7Z4H8 507 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 MDGA2Q7Z553 956 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ADGRG6Q86SQ4 1221 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ZNF329Q86UD4 541 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 CCDC105Q8IYK2 499 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 GHDCQ8N2G8 530 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SLC25A41Q8N5S1 370 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 TMEM170AQ8WVE7 144 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 FAR1Q8WVX9 515 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 RAB40AQ8WXH6 277 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 LPAR1Q92633 364 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 KCNJ9Q92806 393 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SAAL1Q96ER3 474 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 MCRS1Q96EZ8 462 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 CCDC34Q96HJ3 373 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 MAELQ96JY0 434 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 ADAD1Q96M93 576 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 ZNF347Q96SE7 839 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 TM2D2Q9BX73 214 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 INTS2Q9H0H0 1204 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 OSBPL5Q9H0X9 879 aaPredicted RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 STN1Q9H668 368 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 MOV10Q9HCE1 1003 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 PNRC2Q9NPJ4 139 aaKnown RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 SEMA4BQ9NPR2 832 aaPredicted RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 TMEM160Q9NX00 188 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ARL15Q9NXU5 204 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 GRHL1Q9NZI5 618 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 SELENONQ9NZV5 590 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 MPP6Q9NZW5 540 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ERRFI1Q9UJM3 462 aaPredicted RBP2.31□□□□□ -2.04
CDC40-204ENST00000431461 LAMP3Q9UQV4 416 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 LZTS1Q9Y250 596 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ITIH6Q6UXX5 1313 aa2.31□□□□□ -2.04
CDC40-204ENST00000431461 ARHGAP10A1A4S6 786 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 SLC22A23A1A5C7 686 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 B9A039 149 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 FAM157AC9JC47 383 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 NTN3O00634 580 aaPredicted RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 SPTLC2O15270 562 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 KLK10O43240 276 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 EPB41L2O43491 1005 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 DHX16O60231 1041 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 CAMTA2O94983 1202 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CCNDBP1O95273 360 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 SYF2O95926 243 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 IL1AP01583 271 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CSF1P09603 554 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 ZNF8P17098 575 aaPredicted RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 PTPN2P17706 415 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CD53P19397 219 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CASP2P42575 452 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CLNS1AP54105 237 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 EIF3BP55884 814 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 YPEL5P62699 121 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 PMPCAQ10713 525 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 ASIC2Q16515 512 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 KRT71Q3SY84 523 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 KIAA1755Q5JYT7 1200 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 MANEAQ5SRI9 462 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 C6orf10Q5SRN2 563 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 MTFR2Q6P444 385 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 INO80CQ6PI98 192 aaPredicted RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 SYNE3Q6ZMZ3 975 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 RTL10Q7L3V2 364 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 GSTA5Q7RTV2 222 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 TFAP2DQ7Z6R9 452 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 PATL1Q86TB9 770 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 WDR5BQ86VZ2 330 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CPXM2Q8N436 756 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 TCP11L2Q8N4U5 519 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 ESX1Q8N693 406 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 ARL14EPQ8N8R7 260 aaPredicted RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 EXD3Q8N9H8 876 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 NFKBIDQ8NI38 313 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 NEK9Q8TD19 979 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CSGALNACT1Q8TDX6 532 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CLEC4CQ8WTT0 213 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 ASB5Q8WWX0 329 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 DNASE2BQ8WZ79 361 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 CNOT9Q92600 299 aaKnown RBP2.3□□□□□ -2.04
CDC40-204ENST00000431461 MEIS3Q99687 375 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 PIMREGQ9BSJ6 248 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 TMEM204Q9BSN7 226 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 FUZQ9BT04 418 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 UBN1Q9NPG3 1134 aa2.3□□□□□ -2.04
CDC40-204ENST00000431461 TMEM248Q9NWD8 314 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms