RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SMAD1Q15797 465 aaKnown RBP12.02□□□□□ -0.49
HDAC4-202ENST00000430200 WDR59Q6PJI9 974 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 LRRC31Q6UY01 552 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 PHF13Q86YI8 300 aaPredicted RBP12.02□□□□□ -0.49
HDAC4-202ENST00000430200 EID2Q8N6I1 236 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 MFSD2AQ8NA29 543 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 TSC1Q92574 1164 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 ARHGEF2Q92974 986 aaKnown RBP12.02□□□□□ -0.49
HDAC4-202ENST00000430200 CDC6Q99741 560 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 GPR27Q9NS67 375 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 TMEM248Q9NWD8 314 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 UCKL1Q9NWZ5 548 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 PPARGC1AQ9UBK2 798 aaKnown RBP12.02□□□□□ -0.49
HDAC4-202ENST00000430200 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 IL36AQ9UHA7 158 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 TRIM38O00635 465 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ENC1O14682 589 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ADRB3P13945 408 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 GPD1P21695 349 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 STAT1P42224 750 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 UBXN1Q04323 297 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 TYRO3Q06418 890 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ATXN7L2Q5T6C5 722 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 FAM46CQ5VWP2 391 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ZNF783Q6ZMS7 281 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 TRIM72Q6ZMU5 477 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 CYP4V2Q6ZWL3 525 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ERN2Q76MJ5 926 aaKnown RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 STRADAQ7RTN6 431 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 HORMAD1Q86X24 394 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 C3orf20Q8ND61 904 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 TMIEQ8NEW7 156 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 CNDP2Q96KP4 475 aaKnown RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 MCEEQ96PE7 176 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 PEBP4Q96S96 227 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 TRIM7Q9C029 511 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ZDHHC6Q9H6R6 413 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 GPATCH2LQ9NWQ4 482 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 ADAM22Q9P0K1 906 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 DMTF1Q9Y222 760 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
HDAC4-202ENST00000430200 CFAP46Q8IYW2 2715 aa12.01□□□□□ -0.49
HDAC4-202ENST00000430200 PTPRQQ9UMZ3 2332 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 SCN8AQ9UQD0 1980 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 LY6G6EA0A0G2JKS1 128 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 POM121BA6NF01 834 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 CASC3O15234 703 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 PLEKP08567 350 aaPredicted RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 THEGLP0DJG4 465 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 MYF5P13349 255 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 RHOQP17081 205 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ITIH2P19823 946 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ITGB7P26010 798 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 NSFP46459 744 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 RXRGP48443 463 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 CA9Q16790 459 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 PROX2Q3B8N5 592 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 SETMARQ53H47 684 aaPredicted RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 RWDD4Q6NW29 188 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 IRF2BP2Q7Z5L9 587 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ABI3BPQ7Z7G0 1075 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 SLC25A45Q8N413 288 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ARFGAP1Q8N6T3 406 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 PCDH20Q8N6Y1 951 aaKnown RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 MSANTD4Q8NCY6 345 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 NEK11Q8NG66 645 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 NTAN1Q96AB6 310 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 TBC1D31Q96DN5 1066 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 CRELD1Q96HD1 420 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 KLF6Q99612 283 aaPredicted RBP12□□□□□ -0.49
HDAC4-202ENST00000430200 AGPAT1Q99943 283 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 HDAC8Q9BY41 377 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 CEP44Q9C0F1 390 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ERVMER34-1Q9H9K5 563 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 RAXQ9Y2V3 346 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 FADS3Q9Y5Q0 445 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 U3KQA8 63 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 KNTC1P50748 2209 aa12□□□□□ -0.49
HDAC4-202ENST00000430200 ATRXP46100 2492 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 LRRC10BA6NIK2 292 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 PRAMEF26H0Y7S4 382 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 TMCC1O94876 653 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 PRNPP04156 253 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 ITGAVP06756 1048 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 KRT3P12035 628 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms