RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 COQ8BQ96D53 544 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 EYA3Q99504 573 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 PIP5K1AQ99755 562 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 GATA5Q9BWX5 397 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 TM2D2Q9BX73 214 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 CCDC68Q9H2F9 335 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 TAOK3Q9H2K8 898 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 IPO11Q9UI26 975 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC12A4Q9UP95 1085 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZMYM2Q9UBW7 1377 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 NPIPB13A6NJU9 1138 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SH2D7A6NKC9 451 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 C2CD4BA6NLJ0 364 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 C16orf96A6NNT2 1141 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 NPIPB5A8MRT5 1133 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 NPIPB4C9JG80 1138 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 F8W810 466 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 PPEF2O14830 753 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TLR2O60603 784 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CNOT3O75175 753 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 MOSPD3O75425 235 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ERAL1O75616 437 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TOP3BO95985 862 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPN1P04843 607 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CYP3A4P08684 503 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 WEE2P0C1S8 567 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ARSAP15289 507 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ST6GAL1P15907 406 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 IGFBP2P18065 325 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 IL11P20809 199 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TGM2P21980 687 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 HOXA7P31268 230 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 GRK5P34947 590 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 PBX3P40426 434 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 DPP6P42658 865 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CPA2P48052 419 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SOX2P48431 317 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 EFNA5P52803 228 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 RBM6P78332 1123 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ROR1Q01973 937 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 THOC5Q13769 683 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 KLF9Q13886 244 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 WTAPQ15007 396 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 MED22Q15528 200 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ETFDHQ16134 617 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ANXA2RQ3ZCQ2 193 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 Q4G0T1 1027 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 DUSP28Q4G0W2 176 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC9B1Q4ZJI4 515 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF766Q5HY98 468 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 EARS2Q5JPH6 523 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 C10orf25Q5T742 122 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 MFSD4BQ5TF39 518 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 NAPEPLDQ6IQ20 393 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 DENND1BQ6P3S1 775 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 INO80CQ6PI98 192 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SHC4Q6S5L8 630 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 DHRS13Q6UX07 377 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF793Q6ZN11 406 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 FAM57BQ71RH2 274 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TFAP2DQ7Z6R9 452 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ANKRD23Q86SG2 305 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CCDC191Q8NCU4 936 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 NCSTNQ92542 709 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SH3KBP1Q96B97 665 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 FAM120BQ96EK7 910 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 RADILQ96JH8 1075 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TIGD1Q96MW7 591 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 PPP1R10Q96QC0 940 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 PIGSQ96S52 555 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TUBB6Q9BUF5 446 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ABHD14AQ9BUJ0 271 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 HDHD5Q9BXW7 423 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TXLNGYQ9BZA5 131 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 INTS2Q9H0H0 1204 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 MUC13Q9H3R2 512 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 SFXN1Q9H9B4 322 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 EIF2B3Q9NR50 452 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 PAPOLBQ9NRJ5 636 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TRNAU1APQ9NX07 287 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 TAS2R10Q9NYW0 307 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CNOT7Q9UIV1 285 aaKnown RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF580Q9UK33 172 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF215Q9UL58 517 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 B3GNT3Q9Y2A9 372 aa3.18□□□□□ -1.9
HMGB1P9-201ENST00000429856 CYP3A7-CYP3A51PA0A087WV96 503 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3DA0A087WVF3 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3EA0A087X179 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3KA0A087X1G2 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 A0A1W2PQM1 296 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC22A23A1A5C7 686 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3BA6NDS4 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3FA6NER0 549 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3LB9A6J9 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 GTPBP1O00178 669 aaKnown RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SOCS2O14508 198 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 VILLO15195 856 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms