RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 S100A14Q9HCY8 104 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 CNGB3Q9NQW8 809 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 HCFC1R1Q9NWW0 138 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 UBAP1Q9NZ09 502 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 GMIPQ9P107 970 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 FBP2O00757 339 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 TYROBPO43914 113 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 FBXO21O94952 628 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 GLP2RO95838 553 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 CYP1A2P05177 515 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 KRT3P12035 628 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 PGFP49763 221 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 NR1H2P55055 460 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 RPL7AP62424 266 aaKnown RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 CDK18Q07002 472 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 MSLNQ13421 630 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 MAMLD1Q13495 774 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 PTK6Q13882 451 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 SIX1Q15475 284 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 DEPDC1Q5TB30 811 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ELMSAN1Q6PJG2 1045 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ARPINQ7Z6K5 226 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 DNAJB7Q7Z6W7 309 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 ITIH5Q86UX2 942 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 CCDC25Q86WR0 208 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ZFP28Q8NHY6 868 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 PPP1R14CQ8TAE6 165 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ZNF564Q8TBZ8 553 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 PYROXD1Q8WU10 500 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 EDEM1Q92611 657 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 MCRS1Q96EZ8 462 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ZNF512Q96ME7 567 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 VPS11Q9H270 941 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 ZNF334Q9HCZ1 680 aaPredicted RBP11.62□□□□□ -0.55
CECR3-201ENST00000428828 DPP7Q9UHL4 492 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 COG5Q9UP83 839 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 SCINQ9Y6U3 715 aa11.62□□□□□ -0.55
CECR3-201ENST00000428828 A0A1W2PQH9 124 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 CFAP69A5D8W1 941 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 GOLGA8TH3BQL2 631 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 MTA2O94776 668 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 TNFAIP8O95379 198 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 MYL4P12829 197 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 HMGA1P17096 107 aaKnown RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 NAT1P18440 290 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 PPARGP37231 505 aaPredicted RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 YWHAGP61981 247 aaKnown RBP eCLIP11.61□□□□□ -0.55
CECR3-201ENST00000428828 APOFQ13790 326 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 RARS2Q5T160 578 aaKnown RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 RWDD4Q6NW29 188 aaKnown RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 CENPUQ71F23 418 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 BHLHA9Q7RTU4 235 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 NANOGNBQ7Z5D8 188 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 SLC13A5Q86YT5 568 aaPredicted RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 ZDHHC17Q8IUH5 632 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 CASP10Q92851 521 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 BHMTQ93088 406 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 PANX3Q96QZ0 392 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 MRPL47Q9HD33 250 aaKnown RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 CLDND1Q9NY35 253 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 HEY2Q9UBP5 337 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 FETUBQ9UGM5 382 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 ANAPC7Q9UJX3 599 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 NUDT5Q9UKK9 219 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
CECR3-201ENST00000428828 SCML2Q9UQR0 700 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 BRWD1Q9NSI6 2320 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 XIRP2A4UGR9 3374 aa11.61□□□□□ -0.55
CECR3-201ENST00000428828 A0A088AWK7 358 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 TCRBV5S1A1TA0A578 114 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 XYLBO75191 536 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 LTFP02788 710 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 IVDP26440 423 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 SLC5A2P31639 672 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 RFC1P35251 1148 aaPredicted RBP11.6□□□□□ -0.55
CECR3-201ENST00000428828 CCT8P50990 548 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 NUP107P57740 925 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 CCDC85BQ15834 202 aaPredicted RBP11.6□□□□□ -0.55
CECR3-201ENST00000428828 EFHC1Q5JVL4 640 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 PM20D1Q6GTS8 502 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 TMEM126BQ8IUX1 230 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 EFHBQ8N7U6 833 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 CEP70Q8NHQ1 597 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
CECR3-201ENST00000428828 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms